Browse by MODEL: Hybrid

SASDWU6 – Human anterior gradient protein 2 (AGR2)

Anterior gradient protein 2 homolog experimental SAS data
MULTIFOXS model
Sample: Anterior gradient protein 2 homolog dimer, 30 kDa Homo sapiens protein
Buffer: 20 mM Tris pH7.4, 150 mM NaCl, 1% glycerol, 0.2 mM TCEP, pH: 7.4
Experiment: SAXS data collected at B21, Diamond Light Source on 2024 May 5
A structural basis for chaperone repression of stress signaling from the endoplasmic reticulum. Mol Cell (2025)
Neidhardt L, Tung J, Kuchersky M, Milczarek J, Kargas V, Stott K, Rosenzweig R, Ron D, Yan Y
RgGuinier 2.0 nm
Dmax 6.3 nm
VolumePorod 30 nm3

SASDWK5 – Listeria monocytogenes Chitinase (ChiA)

chitinase experimental SAS data
REFMAC model
Sample: Chitinase monomer, 36 kDa Listeria monocytogenes serovar … protein
Buffer: 20 mM Tris, 200 mM NaCl, pH: 8
Experiment: SAXS data collected at B21, Diamond Light Source on 2024 Aug 4
Structure and analysis of a virulent chitinase from Listeria monocytogenes. Biochim Biophys Acta Proteins Proteom :141106 (2025)
Rehman S, Baczynska M, Zhang B, Lorenz CD, Garnett JA
RgGuinier 2.2 nm
Dmax 5.6 nm
VolumePorod 58 nm3

SASDVJ8 – S9 peptidase form Rhizobium radiobacter (6mg/ml)

S9 peptidase form Rhizobium radiobacter experimental SAS data
DAMMIN model
Sample: S9 peptidase form Rhizobium radiobacter monomer, 74 kDa Agrobacterium radiobacter protein
Buffer: 10 mM Tris-HCl, 135 mM NaCl, pH: 8
Experiment: SAXS data collected at BL-18, INDUS-2 on 2024 Mar 21
Structural and functional characterization of S9 peptidase form Rhizobium radiobacter
Dr. Rahul Singh
RgGuinier 3.5 nm
Dmax 9.5 nm
VolumePorod 137 nm3

SASDVK8 – S9 peptidase form Rhizobium radiobacter (4mg/ml)

S9 peptidase form Rhizobium radiobacter experimental SAS data
DAMMIN model
Sample: S9 peptidase form Rhizobium radiobacter monomer, 74 kDa Agrobacterium radiobacter protein
Buffer: 10 mM Tris-HCl, 135 mM NaCl, pH: 8
Experiment: SAXS data collected at BL-18, INDUS-2 on 2024 Mar 21
Structural and functional characterization of S9 peptidase form Rhizobium radiobacter
Dr. Rahul Singh
RgGuinier 3.6 nm
Dmax 9.5 nm
VolumePorod 128 nm3

SASDXY8 – Repeats-in-toxin domain Block V of Bifunctional hemolysin/adenylate cyclase, 10 mM SrCl2

Repeats-in-toxin domain Block V of adenylate cyclase toxin experimental SAS data
ALPHAFOLD model
Sample: Repeats-in-toxin domain Block V of adenylate cyclase toxin monomer, 19 kDa Bordetella pertussis protein
Buffer: 50 mM Tris, 5 mM DTT, 10 mM SrCl2, pH: 7.5
Experiment: SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2024 Aug 1
Ion-selective conformational stabilization of a disordered repeats-in-toxin protein domain. Biophys J (2025)
Gudinas AP, Shambharkar GM, Chang MP, Fernández D, Matsui T, Mai DJ
RgGuinier 2.1 nm
Dmax 10.1 nm
VolumePorod 36 nm3

SASDXZ8 – Repeats-in-toxin domain Block V of Bifunctional hemolysin/adenylate cyclase, 3 mM CaCl2

Repeats-in-toxin domain Block V of adenylate cyclase toxin experimental SAS data
Sample: Repeats-in-toxin domain Block V of adenylate cyclase toxin monomer, 19 kDa Bordetella pertussis protein
Buffer: 50 mM Tris, 5 mM DTT , 3 mM CaCl2, pH: 7.5
Experiment: SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2024 Dec 12
Ion-selective conformational stabilization of a disordered repeats-in-toxin protein domain. Biophys J (2025)
Gudinas AP, Shambharkar GM, Chang MP, Fernández D, Matsui T, Mai DJ
RgGuinier 2.0 nm
Dmax 8.8 nm
VolumePorod 38 nm3

SASDWT3 – crTPpart2 of N-acetyl-gamma-glutamyl-phosphate reductase (ArgC)

crTPpart2 of N-acetyl-gamma-glutamyl-phosphate reductase (ArgC) experimental SAS data
CORAL model
Sample: CrTPpart2 of N-acetyl-gamma-glutamyl-phosphate reductase (ArgC) monomer, 14 kDa Paulinella chromatophora protein
Buffer: 20 mM HEPES, 300 mM NaCl, pH: 8
Experiment: SAXS data collected at EMBL P12, PETRA III on 2022 Sep 14
The Paulinella chromatophore transit peptide part2 adopts a structural fold similar to the γ-glutamyl-cyclotransferase fold Plant Physiology (2025)
Klimenko V, Reiners J, Applegate V, Reimann K, Popowicz G, Hoeppner A, Papadopoulos A, Smits S, Nowack E
RgGuinier 1.7 nm
Dmax 5.8 nm
VolumePorod 27 nm3

SASDXF6 – Multi-domain human O-GlcNAcase

Protein O-GlcNAcase experimental SAS data
ALPHAFOLD model
Sample: Protein O-GlcNAcase dimer, 163 kDa Homo sapiens protein
Buffer: 25 mM Tris buffer, 150 mM NaCl, and 0.5 mM TCEP, pH: 7.5
Experiment: SAXS data collected at Bruker Nanostar w Excillum source, Department of Chemistry, iNANO building, Aarhus Uinversity on 2023 Jun 22
Multi-domain O-GlcNAcase structures reveal allosteric regulatory mechanisms Nature Communications 16(1) (2025)
Hansen S, Bartual S, Yuan H, Raimi O, Gorelik A, Ferenbach A, Lytje K, Pedersen J, Drace T, Boesen T, van Aalten D
RgGuinier 5.4 nm
Dmax 18.9 nm
VolumePorod 443 nm3

SASDTR2 – Turkey Avisivirus 2A3 (TuAsV 2A3) polyprotein fragment at pH 5.4

Genome polyprotein experimental SAS data
ALPHAFOLD model
Sample: Genome polyprotein monomer, 13 kDa Turkey avisivirus protein
Buffer: 20 mM citrate pH 5.4, 150 mM NaCl, 2 mM TCEP, 1% glycerol, pH: 5.4
Experiment: SAXS data collected at EMBL P12, PETRA III on 2022 May 2
Solution structure and functional characterization of an avian picornavirus 2AH/NC protein
Anna Wehlin
RgGuinier 1.7 nm
Dmax 7.2 nm
VolumePorod 29 nm3

SASDTS2 – Turkey Avisivirus 2A3 (TuAsV 2A3) polyprotein fragment at pH 6.5

Genome polyprotein experimental SAS data
ALPHAFOLD model
Sample: Genome polyprotein monomer, 13 kDa Turkey avisivirus protein
Buffer: 20mM Citrate buffer pH 6.5, 150mM NaCl, 2mM TCEP, 1% glycerol, pH: 6.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2023 May 15
Solution structure and functional characterization of an avian picornavirus 2AH/NC protein
Anna Wehlin
RgGuinier 1.6 nm
Dmax 6.0 nm
VolumePorod 27 nm3