Small Angle Scattering Biological Data Bank SASBDB

Browse by MACROMOLECULE type: protein

SASDJ27 – Collagenase H C-terminal non-catalytic segments Polycystic Kidney disease domain 2 (PKD2) and Collagen binding domain (CBD) with Tyr780Ser, His782Ser, Tyr796Ser and Tyr801Ser bound to triple helical collagen like-peptide

Collagen like-peptide [GPRG(POG)13]Collagenase ColH (Polycystic kidney disease domain 2 (PKD2) and Collagen binding domain (CBD) with Tyr780Ser, His782Ser, Tyr796Ser and Tyr801Ser) experimental SAS data

Sample:	Collagen like-peptide [GPRG(POG)13] trimer, 11 kDa protein Collagenase ColH (Polycystic kidney disease domain 2 (PKD2) and Collagen binding domain (CBD) with Tyr780Ser, His782Ser, Tyr796Ser and Tyr801Ser) monomer, 23 kDa Hathewaya histolytica protein
Buffer:	50 mM HEPES, 100 mM NaCl, 5 mM CaCl2, pH: 7.5
Experiment:	SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2019 Mar 5

Elucidating Collagen Degradation Synergy between Col G and Col H from Hathewaya (Clostridium) histolytica and Identifying novel structural features in HPT and REC domains from VarS histidine kinase in V. alginolyticus University of Arkansas PhD thesis 28030553 (2020)
Perry Caviness

R_g^Guinier	3.2	nm
D_max	18.0	nm
Volume^Porod	34	nm³

SASDJ37 – Collagenase H C-terminal non-catalytic segments Polycystic Kidney disease domain 2 (PKD2) and Collagen binding domain (CBD) bound to triple helical collagen like-peptide

Collagenase ColH (Polycystic kidney disease domain 2 (PKD2) and Collagen binding domain (CBD))Collagen like-peptide [GPRG(POG)13] experimental SAS data

Sample:	Collagenase ColH (Polycystic kidney disease domain 2 (PKD2) and Collagen binding domain (CBD)) monomer, 23 kDa Hathewaya histolytica protein Collagen like-peptide [GPRG(POG)13] trimer, 11 kDa protein
Buffer:	50 mM HEPES, 100 mM NaCl, 5 mM CaCl2, pH: 7.5
Experiment:	SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2019 Mar 5

R_g^Guinier	3.3	nm
D_max	18.0	nm
Volume^Porod	35	nm³

SASDHH4 – N-terminal domain of Wag31 from M. tuberculosis

Cell wall synthesis protein Wag31 experimental SAS data

Cell wall synthesis protein Wag31 Kratky plot

Sample:	Cell wall synthesis protein Wag31 tetramer, 34 kDa Mycobacterium tuberculosis protein
Buffer:	20 mM Tris pH 7.5, 150 mM NaCl, 10% glycerol, pH: 7.5
Experiment:	SAXS data collected at BM29, ESRF on 2018 Sep 3

Structural basis of self-assembly in the lipid-binding domain of mycobacterial polar growth factor Wag31 IUCrJ 7(4):767-776 (2020)
Choukate K, Chaudhuri B

R_g^Guinier	2.7	nm
D_max	10.0	nm
Volume^Porod	52	nm³

SASDG75 – Pomacea diffusa perivitellin-1

Pomacea diffusa perivitellin-1 experimental SAS data

Sample:	Pomacea diffusa perivitellin-1, 23 kDa Pomacea diffusa protein
Buffer:	50 mM Phosphate buffer, pH: 7.4
Experiment:	SAXS data collected at SAXS2 Beamline, Brazilian Synchrotron Light Laboratory on 2015 Mar 27

A highly stable, non-digestible lectin from Pomacea diffusa unveils clade-related protection systems in apple snail eggs. J Exp Biol 223(Pt 19) (2020)
Brola TR, Dreon MS, Qiu JW, Heras H

R_g^Guinier	4.6	nm
D_max	15.5	nm
Volume^Porod	529	nm³

SASDHV8 – Human serum albumin/Neprilysin fusion protein (HSA-NEP): 10 mM histidine, pH 5.0

Neprilysin - G400V mutantHuman serum albumin - C58S mutant experimental SAS data

Sample:	Neprilysin - G400V mutant monomer, 80 kDa Homo sapiens protein Human serum albumin - C58S mutant monomer, 66 kDa Homo sapiens protein
Buffer:	10 mM histidine, pH: 5
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2017 Dec 21

Albumin-neprilysin fusion protein: understanding stability using small angle X-ray scattering and molecular dynamic simulations. Sci Rep 10(1):10089 (2020)
Kulakova A, Indrakumar S, Sønderby Tuelung P, Mahapatra S, Streicher WW, Peters GHJ, Harris P

R_g^Guinier	4.9	nm
D_max	16.0	nm
Volume^Porod	267	nm³

SASDHW8 – Human serum albumin/Neprilysin fusion protein (HSA-NEP): 10 mM histidine, pH 5.5

Sample:	Neprilysin - G400V mutant monomer, 80 kDa Homo sapiens protein Human serum albumin - C58S mutant monomer, 66 kDa Homo sapiens protein
Buffer:	10 mM histidine, pH: 5.5
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2017 Dec 21

R_g^Guinier	4.9	nm
D_max	16.0	nm
Volume^Porod	274	nm³

SASDHX8 – Human serum albumin/Neprilysin fusion protein (HSA-NEP): 10 mM histidine, pH 6.5

Sample:	Neprilysin - G400V mutant monomer, 80 kDa Homo sapiens protein Human serum albumin - C58S mutant monomer, 66 kDa Homo sapiens protein
Buffer:	10 mM histidine, pH: 6.5
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2018 Jul 7

R_g^Guinier	4.6	nm
D_max	16.0	nm
Volume^Porod	258	nm³

SASDHY8 – Human serum albumin/Neprilysin fusion protein (HSA-NEP): 10 mM histidine, pH 7.5

Sample:	Neprilysin - G400V mutant monomer, 80 kDa Homo sapiens protein Human serum albumin - C58S mutant monomer, 66 kDa Homo sapiens protein
Buffer:	10 mM histidine, pH: 7.5
Experiment:	SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2017 Jun 26

R_g^Guinier	5.0	nm
D_max	17.4	nm
Volume^Porod	270	nm³

SASDHZ8 – Human serum albumin/Neprilysin fusion protein (HSA-NEP): 10 mM TRIS, pH 8.5

Sample:	Neprilysin - G400V mutant monomer, 80 kDa Homo sapiens protein Human serum albumin - C58S mutant monomer, 66 kDa Homo sapiens protein
Buffer:	10 mM TRIS, pH: 8.5
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2018 Dec 15

R_g^Guinier	4.9	nm
D_max	16.7	nm
Volume^Porod	239	nm³

SASDH29 – Human serum albumin/Neprilysin fusion protein (HSA-NEP): 10 mM phosphate, pH 6.5

Sample:	Neprilysin - G400V mutant monomer, 80 kDa Homo sapiens protein Human serum albumin - C58S mutant monomer, 66 kDa Homo sapiens protein
Buffer:	10 mM phosphate, pH: 6.5
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2018 Jul 7

R_g^Guinier	4.9	nm
D_max	16.7	nm
Volume^Porod	240	nm³

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