Small Angle Scattering Biological Data Bank SASBDB

SASDLQ5 – Tricorn protease oligomers

Sample:	Tricorn protease hexamer, 730 kDa Thermoplasma acidophilum (strain … protein
Buffer:	20mM Tris-HCl, 100 mM NaCl, pH: 7.5
Experiment:	SAXS data collected at EMBL X33, DORIS III, DESY on 2003 Jan 14

X-ray snapshots of peptide processing in mutants of tricorn-interacting factor F1 from Thermoplasma acidophilum. J Biol Chem 280(39):33387-96 (2005)
Goettig P, Brandstetter H, Groll M, Göhring W, Konarev PV, Svergun DI, Huber R, Kim JS

R_g^Guinier

5.9

SASDM77 – Full-length polypyrimidine tract binding protein (PTB)

Polypyrimidine tract-binding protein 2 experimental SAS data

Sample:	Polypyrimidine tract-binding protein 2 monomer, 57 kDa Homo sapiens protein
Buffer:	25 mM Tris, 250 mM NaCl, 2 mM DTT, pH: 7.2
Experiment:	SAXS data collected at EMBL X33, DORIS III, DESY on 2004 Feb 11

Structure and RNA interactions of the N-terminal RRM domains of PTB. Structure 12(9):1631-43 (2004)
Simpson PJ, Monie TP, Szendröi A, Davydova N, Tyzack JK, Conte MR, Read CM, Cary PD, Svergun DI, Konarev PV, Curry S, Matthews S

R_g^Guinier	4.0	nm
D_max	14.0	nm
Volume^Porod	117	nm³

SASDC52 – Bruton tyrosine kinase

Tyrosine-protein kinase BTK (R28C mutant) experimental SAS data

Sample:	Tyrosine-protein kinase BTK (R28C mutant) monomer, 76 kDa Homo sapiens protein
Buffer:	20 mM HEPES 200 mM NaCl, 2 mM DTT and 1 mM MgCl2, pH: 7.5
Experiment:	SAXS data collected at EMBL X33, DORIS III, DESY on 2002 Apr 2

Conformation of full-length Bruton tyrosine kinase (Btk) from synchrotron X-ray solution scattering. EMBO J 22(18):4616-24 (2003)
Márquez JA, Smith CI, Petoukhov MV, Lo Surdo P, Mattsson PT, Knekt M, Westlund A, Scheffzek K, Saraste M, Svergun DI

R_g^Guinier	5.0	nm
D_max	20.0	nm
Volume^Porod	130	nm³

SASDLN7 – 1:1 complex of Ferredoxin-dependent glutamate synthase 2 (FdGlts) with ferredoxin

Ferredoxin-dependent glutamate synthase 2Ferredoxin-1 experimental SAS data

Sample:	Ferredoxin-dependent glutamate synthase 2 monomer, 169 kDa Synechocystis sp. (strain … protein Ferredoxin-1 monomer, 11 kDa Nostoc sp. (strain … protein
Buffer:	Hepes– KOH buffer, pH: 7.5
Experiment:	SAXS data collected at EMBL X33, DORIS III, DESY on 2002 Jun 4

The Active Conformation of Glutamate Synthase and its Binding to Ferredoxin Journal of Molecular Biology 330(1):113-128 (2003)
van den Heuvel R, Svergun D, Petoukhov M, Coda A, Curti B, Ravasio S, Vanoni M, Mattevi A

R_g^Guinier	3.6	nm
D_max	12.3	nm
Volume^Porod	262	nm³

SASDLB7 – Procollagen C-proteinase enhancer

Procollagen C-endopeptidase enhancer 1 experimental SAS data

Sample:	Procollagen C-endopeptidase enhancer 1 monomer, 46 kDa Homo sapiens protein
Buffer:	20 mM Hepes, 500 mM NaCl, pH: 7.4
Experiment:	SAXS data collected at EMBL X33, DORIS III, DESY on 2002 Jul 9

Low Resolution Structure Determination Shows Procollagen C-Proteinase Enhancer to be an Elongated Multidomain Glycoprotein Journal of Biological Chemistry 278(9):7199-7205 (2003)
Bernocco S, Steiglitz B, Svergun D, Petoukhov M, Ruggiero F, Ricard-Blum S, Ebel C, Geourjon C, Deléage G, Font B, Eichenberger D, Greenspan D, Hulmes D

R_g^Guinier	4.1	nm
D_max	15.0	nm
Volume^Porod	117	nm³

SASDAX2 – Pyruvate decarboxylase (PDC) from Z. mobilis

Pyruvate decarboxylase experimental SAS data

Sample:	Pyruvate decarboxylase tetramer, 244 kDa Zymomonas mobilis protein
Buffer:	100 mM Sodium Citrate, 17% Glycerol, 22.5% PEG 1500, pH: 6
Experiment:	SAXS data collected at EMBL X33, DORIS III, DESY on 1998 Nov 3

Crystal versus solution structures of thiamine diphosphate-dependent enzymes. J Biol Chem 275(1):297-302 (2000)
Svergun DI, Petoukhov MV, Koch MH, König S

R_g^Guinier	3.9	nm
D_max	11.0	nm

SASDNF8 – LARGE xylosyl- and glucuronyltransferase 1 (LARGE1dTM) dimer

Xylosyl- and glucuronyltransferase LARGE1 experimental SAS data

Sample:	Xylosyl- and glucuronyltransferase LARGE1 dimer, 179 kDa Homo sapiens protein
Buffer:	20 mM HEPES, 150 mM NaCl, pH: 7.4
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2022 Mar 18

LARGE1 processively polymerizes length-controlled matriglycan on prodystroglycan. Nat Commun 16(1):9028 (2025)
Joseph S, Schnicker NJ, Spellmon N, Xu Z, Yan R, Yu Z, Davulcu O, Yang T, Hopkins J, Anderson ME, Venzke D, Campbell KP

R_g^Guinier	4.4	nm
D_max	18.4	nm
Volume^Porod	264	nm³

SASDNG8 – LARGE xylosyl- and glucuronyltransferase 1 (LARGE1dTM) dimer treated with PNGase F enzyme

Sample:	Xylosyl- and glucuronyltransferase LARGE1 dimer, 179 kDa Homo sapiens protein
Buffer:	20 mM HEPES, 150 mM NaCl, pH: 7.4
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2022 Mar 18

R_g^Guinier	4.3	nm
D_max	18.0	nm

SASDNH8 – Xylosyl- and glucuronyltransferase LARGE2 (LARGE2dTM) dimer

Xylosyl- and glucuronyltransferase LARGE2 experimental SAS data

Sample:	Xylosyl- and glucuronyltransferase LARGE2 dimer, 168 kDa Mus musculus protein
Buffer:	20 mM HEPES, 150 mM NaCl, pH: 7.4
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2022 Mar 18

R_g^Guinier	4.2	nm
D_max	16.5	nm

SASDNJ8 – Xylosyl- and glucuronyltransferase LARGE2 (LARGE2dTM) dimer treated with PNGase F enzyme

Sample:	Xylosyl- and glucuronyltransferase LARGE2 dimer, 168 kDa Mus musculus protein
Buffer:	20 mM HEPES, 150 mM NaCl, pH: 7.4
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2022 Mar 18

R_g^Guinier	4.1	nm
D_max	15.9	nm
Volume^Porod	231	nm³

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