{"code":"SASDA37","status":"Published","type_of_curve":"Single concentration","angular_unit":"1/nm","project":{"title":"Cooperative folding of intrinsically disordered domains drives assembly of a strong elongated protein.","publication":{"title":"Cooperative folding of intrinsically disordered domains drives assembly of a strong elongated protein.","author_list":"Gruszka DT, Whelan F, Farrance OE, Fung HK, Paci E, Jeffries CM, Svergun DI, Baldock C, Baumann CG, Brockwell DJ, Potts JR, Clarke J","journal":"Nat Commun","doi":"10.1038/ncomms8271","pmid":"26027519","published_date":"2015 Jun 1"},"status":"released","submitted_date":"2014-11-27","released_date":"2015-07-07"},"pddf_data":"https://www.sasbdb.org/media/p_of_R_files/SASDA37.out","intensities_data":"https://www.sasbdb.org/media/intensities_files/SASDA37.dat","intensities_log_plot":"https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDA37_dat_img.png","intensities_kratky_plot":"https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDA37_kratky_img.png","pddf_plot":"https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDA37_pofr_img.png","intensities_guinier_plot":"https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDA37_guinier_img.png","sascif_data":"https://www.sasbdb.org/media/sascif/sascif_files/SASDA37.sascif","experiment":{"instrument":{"detector":{"type":null,"name":"Pilatus 2M","resolution":null},"name":"PETRA III","city":"DESY; Hamburg","country":"Germany","beamline_name":"EMBL P12","beam_geometry":null,"type_of_source":"X-ray synchrotron","point_source":null,"line_collimation":null,"sample_path_length":null,"line_collimation_slitlength":null,"line_collimation_integrationwidth":null,"xray_energy":null,"beam_profile_ah":null,"beam_profile_al":null},"sample":{"molecule":[{"long_name":"Surface protein G","short_name":"SasG","sequence":"GPHMAPKTITELEKKVEEIPFKKERKFNPDLAPGTEKVTREGQKGEKTITTPTLKNPLTGVIISKGEPKEEITKDPINELTEYGPETIAPGHRDEFDPKLPTGEKEEVPGKPGIKNPETGDVVRPPVDSVTKYGPVKGDSIVEKEEIPFEKERKFNPDLAPGTEKVTREGQKGEKTITTPTLKNPLTGEIISKGESKEEITKDPINELTEYGPET","organism":"Staphylococcus aureus","uniprot_code":"Q2G2B2","uniprot_range_first":420,"uniprot_range_last":629,"oligomerization":"monomer","molecular_type":"protein","uniprot_sequence":"MRDKKGPVNKRVDFLSNKLNKYSIRKFTVGTASILIGSLMYLGTQQEAEAAENNIENPTT\nLKDNVQSKEVKIEEVTNKDTAPQGVEAKSEVTSNKDTIEHEPSVKAEDISKKEDTPKEVA\nDVAEVQPKSSVTHNAETPKVRKARSVDEGSFDITRDSKNVVESTPITIQGKEHFEGYGSV\nDIQKKPTDLGVSEVTRFNVGNESNGLIGALQLKNKIDFSKDFNFKVRVANNHQSNTTGAD\nGWGFLFSKGNAEEYLTNGGILGDKGLVNSGGFKIDTGYIYTSSMDKTEKQAGQGYRGYGA\nFVKNDSSGNSQMVGENIDKSKTNFLNYADNSTNTSDGKFHGQRLNDVILTYVASTGKMRA\nEYAGKTWETSITDLGLSKNQAYNFLITSSQRWGLNQGINANGWMRTDLKGSEFTFTPEAP\nKTITELEKKVEEIPFKKERKFNPDLAPGTEKVTREGQKGEKTITTPTLKNPLTGVIISKG\nEPKEEITKDPINELTEYGPETIAPGHRDEFDPKLPTGEKEEVPGKPGIKNPETGDVVRPP\nVDSVTKYGPVKGDSIVEKEEIPFEKERKFNPDLAPGTEKVTREGQKGEKTITTPTLKNPL\nTGEIISKGESKEEITKDPINELTEYGPETITPGHRDEFDPKLPTGEKEEVPGKPGIKNPE\nTGDVVRPPVDSVTKYGPVKGDSIVEKEEIPFEKERKFNPDLAPGTEKVTREGQKGEKTIT\nTPTLKNPLTGVIISKGEPKEEITKDPINELTEYGPETITPGHRDEFDPKLPTGEKEEVPG\nKPGIKNPETGDVVRPPVDSVTKYGPVKGDSIVEKEEIPFKKERKFNPDLAPGTEKVTREG\nQKGEKTITTPTLKNPLTGEIISKGESKEEITKDPINELTEYGPETITPGHRDEFDPKLPT\nGEKEEVPGKPGIKNPETGDVVRPPVDSVTKYGPVKGDSIVEKEEIPFEKERKFNPDLAPG\nTEKVTREGQKGEKTITTPTLKNPLTGEIISKGESKEEITKDPINELTEYGPETITPGHRD\nEFDPKLPTGEKEEVPGKPGIKNPETGDVVRPPVDSVTKYGPVKGDSIVEKEEIPFKKERK\nFNPDLAPGTEKVTREGQKGEKTITTPTLKNPLTGEIISKGESKEEITKDPINELTEYGPE\nTITPGHRDEFDPKLPTGEKEEVPGKPGIKNPETGDVVRPPVDSVTKYGPVKGDSIVEKEE\nIPFEKERKFNPDLAPGTEKVTREGQKGEKTITTPTLKNPLTGEIISKGESKEEITKDPIN\nELTEYGPETITPGHRDEFDPKLPTGEKEEVPGKPGIKNPETGDVVRPPVDSVTKYGPVKG\nDSIVEKEEIPFEKERKFNPDLAPGTEKVTREGQKGEKTITTPTLKNPLTGEIISKGESKE\nEITKDPVNELTEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDV\nIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEK\nVGEGQPTEEITKQPVDKIVEFGGEKPKDPKGPENPEKPSRPTHPSGPVNPNNPGLSKDRA\nKPNGPVHSMDKNDKVKKSKIAKESVANQEKKRAELPKTGLESTQKGLIFSSIIGIAGLML\nLARRRKN","mw":23.729,"total_mw":23.729,"number_molecules":1,"complex_state":null,"deuteration":null,"molecule_source":"biological","molecule_description":null}],"buffer":{"name":"20 mM Tris 200 mM NaCl 1 mM EDTA 20 mM Tris.Cl","concentration_unit":"mM","comment":null,"additive":"200 mM NaCl, 1 mM EDTA, 20 mM Tris.Cl","concentration":20.0,"pka":null,"ph":7.5,"deuteration":null},"purity_method":null,"name":"Surface Protein G (SasG) EG5 repeat protein G51-G52","ext_coefficient":null,"contrast":null,"specific_vol":null,"dry_vol":null,"absorbption":null,"deuteration":null,"mixture":null},"contributor":[{"affiliation":[],"contributor_name":"Fiona","contributor_surname":"Whelan","orcid":null}],"concentration_method":null,"concentration_unit":"mg/ml","date":"2013-11-12","storage_temperature":null,"cell_temperature":10.0,"exposure_time":0.05,"number_of_frames":20,"wavelength":0.12,"sample_detector_distance":3.1,"concentration_min":null,"concentration_max":7.5,"sample_volume":null,"flow_rate":null,"s_min":0.069,"s_max":4.488,"total_exposure_time":null,"seccolumn":null},"fits":[{"models":[{"model_plot":"https://www.sasbdb.org/media/pdb_file/images/SASDA37_fit1_model1_img.png","software":"SASREF","pdb_link":[{"pdb_code":"3tiq","ext_code":"3TIQ","ext_type":"pdb","difference_with_model":null},{"pdb_code":"none","ext_code":"Q2G2B2","ext_type":"alphafold","difference_with_model":"identical"}],"model_title":null,"type_of_model":"atomic","software_version":"","model_data":"https://www.sasbdb.org/media/pdb_file/SASDA37_fit1_model1.pdb","model_mw":23.36,"bead_radius":1.9,"log":null,"symmetry":"","comment":"","user":39}],"fit_unit":"1/A","fit_plot":"https://www.sasbdb.org/media/fitting_files/scattering_plots/SASDA37_fit1_fit_img.png","software":null,"chi_square_value":1.1236,"p_value":0.003173,"fit_residual_plot":"fit4columns193_fitresiduals_img.png","fit_data":"https://www.sasbdb.org/media/fitting_files/SASDA37_fit1.fit","fit_log":null,"software_version":null,"description":null},{"models":[{"model_plot":"https://www.sasbdb.org/media/pdb_file/images/SASDA37_fit2_model1_img.png","software":"GASBOR","pdb_link":[],"model_title":null,"type_of_model":"dummy","software_version":"","model_data":"https://www.sasbdb.org/media/pdb_file/SASDA37_fit2_model1.pdb","model_mw":null,"bead_radius":1.9,"log":null,"symmetry":"","comment":"","user":39}],"fit_unit":"1/A","fit_plot":"https://www.sasbdb.org/media/fitting_files/scattering_plots/SASDA37_fit2_fit_img.png","software":null,"chi_square_value":1.1236,"p_value":0.811058,"fit_residual_plot":"SASDA37_fit2_fitresiduals_img.png","fit_data":"https://www.sasbdb.org/media/fitting_files/SASDA37_fit2.fir","fit_log":null,"software_version":null,"description":null}],"estimated_volume_method":null,"pddf_software":"ATSAS GNOM","pddf_software_version":null,"i0_calibration_standard":null,"description":"SAXS was used to determine whether the EG5 repeat forms an extended rod-like structure in solution.","experiment_description":null,"tags":[],"intensity_unit":null,"experimental_mw":20.3,"experimental_mw_error":null,"guinier_i0_mw":20.3,"guinier_i0_mw_error":null,"porod_mw":23.7,"porod_mw_error":null,"pddf_i0":4206.0,"pddf_i0_error":null,"guinier_i0":4140.4,"guinier_i0_error":null,"pddf_rg":5.08,"pddf_rg_error":null,"guinier_rg":4.72,"guinier_rg_error":null,"pddf_dmax":19.0,"pddf_dmax_error":null,"porod_volume":28.6,"porod_volume_error":null,"estimated_volume":null,"estimated_volume_error":null,"guinier_point_first":null,"guinier_point_last":null,"pddf_point_first":null,"pddf_point_last":null,"i0_calibration_standard_data":null,"intensities_log_log_plot":"SASDA37_datloglog_img.png","symmetry":null,"last_modified":"2023-06-21T07:56:39.492710+02:00","bragg_peak":[]}