{"code":"SASDCA4","status":"Published","type_of_curve":"Single concentration","angular_unit":"1/A","project":{"title":"Revealing the distinct folding phases of an RNA three-helix junction.","publication":{"title":"Revealing the distinct folding phases of an RNA three-helix junction.","author_list":"Plumridge A, Katz AM, Calvey GD, Elber R, Kirmizialtin S, Pollack L","journal":"Nucleic Acids Res","doi":"10.1093/nar/gky363","pmid":"29762712","published_date":"2018 Aug 21"},"status":"released","submitted_date":"2017-06-02","released_date":"2018-05-20"},"pddf_data":"https://www.sasbdb.org/media/p_of_R_files/SASDCA4.out","intensities_data":"https://www.sasbdb.org/media/intensities_files/SASDCA4.dat","intensities_log_plot":"https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDCA4_dat_img.png","intensities_kratky_plot":"https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDCA4_kratky_img.png","pddf_plot":"https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDCA4_pofr_img.png","intensities_guinier_plot":"https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDCA4_guinier_img.png","sascif_data":"https://www.sasbdb.org/media/sascif/sascif_files/SASDCA4.sascif","experiment":{"instrument":{"detector":{"type":"CCD","name":"Finger Lakes CCD","resolution":0.0},"name":"Cornell High Energy Synchrotron Source (CHESS)","city":"Ithaca, NY","country":"USA","beamline_name":"G1","beam_geometry":"","type_of_source":"X-ray synchrotron","point_source":null,"line_collimation":null,"sample_path_length":null,"line_collimation_slitlength":null,"line_collimation_integrationwidth":null,"xray_energy":null,"beam_profile_ah":null,"beam_profile_al":null},"sample":{"molecule":[{"long_name":"Truncated P5abc subdomain from tetrahymena ribozyme","short_name":"tp5abc","sequence":"GGCAGUACCAAGUCGCGAAAGCGAUGGCCUUGCAAAGGGUAUGGUAAUAAGCUGCC","organism":null,"uniprot_code":null,"uniprot_range_first":null,"uniprot_range_last":null,"oligomerization":"monomer","molecular_type":"RNA","uniprot_sequence":null,"mw":18.223,"total_mw":18.223,"number_molecules":1,"complex_state":false,"deuteration":null,"molecule_source":"biological","molecule_description":null}],"buffer":{"name":"10mM KMOPS 20mM KCl 1mM MgCl2 20uM EDTA","concentration_unit":null,"comment":"0ms time point","additive":null,"concentration":null,"pka":null,"ph":7.0,"deuteration":null},"purity_method":null,"name":"Truncated P5abc subdomain from tetrahymena ribozyme: Time-resolved 30ms","ext_coefficient":null,"contrast":null,"specific_vol":null,"dry_vol":null,"absorbption":null,"deuteration":null,"mixture":null},"contributor":[{"affiliation":[{"short_name":null,"address":"Ithaca, NY, United States","full_name":"Cornell University","webpage":"https://www.cornell.edu/"}],"contributor_name":"Alex","contributor_surname":"Plumridge","orcid":null}],"concentration_method":null,"concentration_unit":null,"date":"2016-12-03","storage_temperature":4.0,"cell_temperature":20.0,"exposure_time":5.0,"number_of_frames":50,"wavelength":0.109,"sample_detector_distance":1.72,"concentration_min":null,"concentration_max":1.5,"sample_volume":null,"flow_rate":null,"s_min":0.2,"s_max":2.9,"total_exposure_time":null,"seccolumn":null},"fits":[],"estimated_volume_method":null,"pddf_software":"ATSAS GNOM","pddf_software_version":null,"i0_calibration_standard":null,"description":null,"experiment_description":"Synchrotron SAXS data from solutions of Truncated P5abc subdomain from tetrahymena ribozyme: (Time-resolved 30ms) in 10mM KMOPS 20mM KCl 1mM MgCl2 20uM EDTA, pH 7 were collected on the G1 beam line at the Cornell High Energy Synchrotron Source (CHESS; Ithaca, NY, USA) using a CCD Finger Lakes CCD detector at a sample-detector distance of 1.7 m and at a wavelength of λ = 0.109 nm (I(s) vs s, where s = 4πsinθ/λ and 2θ is the scattering angle). One solute concentration of 1.50 mg/ml was measured at 20°C. 50 successive 5 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.","tags":[],"intensity_unit":null,"experimental_mw":27.8,"experimental_mw_error":null,"guinier_i0_mw":null,"guinier_i0_mw_error":null,"porod_mw":null,"porod_mw_error":null,"pddf_i0":0.107,"pddf_i0_error":0.051,"guinier_i0":1.05,"guinier_i0_error":0.014,"pddf_rg":2.32,"pddf_rg_error":0.01,"guinier_rg":2.23,"guinier_rg_error":0.04,"pddf_dmax":7.0,"pddf_dmax_error":null,"porod_volume":null,"porod_volume_error":null,"estimated_volume":null,"estimated_volume_error":null,"guinier_point_first":16,"guinier_point_last":37,"pddf_point_first":null,"pddf_point_last":null,"i0_calibration_standard_data":null,"intensities_log_log_plot":"SASDCA4_datloglog_img.png","symmetry":null,"last_modified":"2019-12-06T13:07:15.624532+01:00","bragg_peak":[]}