{"code":"SASDZT8","status":"Published","type_of_curve":"Merged","angular_unit":"1/A","project":{"title":"Integrated analysis with iCM-SANS, SAXS and MD simulations for dynamics of multi-domain proteins","publication":{"title":"Integrated analysis with iCM-SANS, SAXS and MD simulations for dynamics of multi-domain proteins","author_list":"Okuda A, Inoue R, Kurokawa M, Martel A, Porcar L, Osaki R, Fukuzawa K, Weiss K, Pingali S, Urade R, Sugiyama M","journal":"Journal of Applied Crystallography","doi":"10.1107/S1600576726005832","pmid":null,"published_date":"2026 Jul 29"},"status":"released","submitted_date":"2026-05-20","released_date":"2026-08-05"},"pddf_data":null,"intensities_data":"https://www.sasbdb.org/media/intensities_files/SASDZT8.dat","intensities_log_plot":"https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDZT8_dat_img.png","intensities_kratky_plot":"https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDZT8_kratky_img.png","pddf_plot":null,"intensities_guinier_plot":"https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDZT8_guinier_img.png","sascif_data":"https://www.sasbdb.org/media/sascif/sascif_files/SASDZT8.sascif","experiment":{"instrument":{"detector":{"type":null,"name":"HyPix-6000","resolution":100.0},"name":"KURNS","city":"Osaka","country":"Japan","beamline_name":"Rigaku NANOPIX","beam_geometry":null,"type_of_source":"X-ray in house","point_source":null,"line_collimation":null,"sample_path_length":null,"line_collimation_slitlength":null,"line_collimation_integrationwidth":null,"xray_energy":null,"beam_profile_ah":null,"beam_profile_al":null},"sample":{"molecule":[{"long_name":"human protein disulfide-isomerase A3","short_name":null,"sequence":"SDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHTNVESLVNEYDDNGEGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGEKFVMQEEFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREATNPPVIQEEKPKKKKKAQEDL","organism":"Homo sapiens","uniprot_code":"P30101","uniprot_range_first":null,"uniprot_range_last":null,"oligomerization":"monomer","molecular_type":"protein","uniprot_sequence":"MRLRRLALFPGVALLLAAARLAAASDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHC\nKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRT\nADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRD\nNYRFAHTNVESLVNEYDDNGEGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENI\nFGICPHMTEDNKDLIQGKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFA\nVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGEKFVMQEEFSRDGKALERFLQDYFDGN\nLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELG\nEKLSKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYL\nQREATNPPVIQEEKPKKKKKAQEDL","mw":54.265,"total_mw":54.265,"number_molecules":1,"complex_state":false,"deuteration":null,"molecule_source":"biological","molecule_description":""}],"buffer":{"name":"20 mM Tris-HCl buffer, 150 mM NaCl, 1mM CaCl2","concentration_unit":null,"comment":null,"additive":null,"concentration":null,"pka":null,"ph":8.0,"deuteration":null},"purity_method":null,"name":"Wild-type version of human protein disulfide-isomerase A3 (ER-60 h(WT))","ext_coefficient":null,"contrast":null,"specific_vol":null,"dry_vol":null,"absorbption":null,"deuteration":null,"mixture":null},"contributor":[{"affiliation":[{"short_name":null,"address":null,"full_name":"Kyoto University","webpage":null}],"contributor_name":"Aya","contributor_surname":"Okuda","orcid":""}],"concentration_method":null,"concentration_unit":null,"date":"2024-09-27","storage_temperature":4.0,"cell_temperature":25.0,"exposure_time":300.0,"number_of_frames":72,"wavelength":1.54182,"sample_detector_distance":1.33,"concentration_min":4.0,"concentration_max":4.0,"sample_volume":null,"flow_rate":null,"s_min":0.061,"s_max":8.104,"total_exposure_time":null,"seccolumn":null},"fits":[],"estimated_volume_method":null,"pddf_software":null,"pddf_software_version":null,"i0_calibration_standard":null,"description":"Two sample-to-detector distance (SDD) conditions, 1330 mm and 300 mm, were used to cover a q range (0.01-0.70 Å-1). Scattering profiles were recorded as 300 s frames, and 72 and 120 frames merged for low q (0.01-0.06 Å-1) and high q (0.06-0.70 Å-1) setups, respectively. We applied the AUC-SAS method to remove aggregation components from the profile.","experiment_description":null,"tags":[],"intensity_unit":"1/cm","experimental_mw":40.558,"experimental_mw_error":null,"guinier_i0_mw":null,"guinier_i0_mw_error":null,"porod_mw":null,"porod_mw_error":null,"pddf_i0":null,"pddf_i0_error":null,"guinier_i0":0.0377635,"guinier_i0_error":null,"pddf_rg":null,"pddf_rg_error":null,"guinier_rg":3.203,"guinier_rg_error":0.028,"pddf_dmax":null,"pddf_dmax_error":null,"porod_volume":null,"porod_volume_error":null,"estimated_volume":null,"estimated_volume_error":null,"guinier_point_first":14,"guinier_point_last":103,"pddf_point_first":null,"pddf_point_last":null,"i0_calibration_standard_data":null,"intensities_log_log_plot":"SASDZT8_datloglog_img.png","symmetry":null,"last_modified":"2026-08-05T11:43:21.265632+02:00","bragg_peak":[]}