Small Angle Scattering Biological Data Bank SASBDB

Browse by MACROMOLECULE type: protein

SASDQM8 – G. gallus TRPV4 intrinsically disordered N-terminus

Transient receptor potential cation channel subfamily V member 4 experimental SAS data

G. gallus TRPV4 intrinsically disordered N-terminus Rg histogram

Sample:	Transient receptor potential cation channel subfamily V member 4 monomer, 15 kDa Gallus gallus protein
Buffer:	20 mM Tris, 100 mM NaCl, 10 mM DTT, pH: 7
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2019 Dec 16

Crosstalk between regulatory elements in disordered TRPV4 N-terminus modulates lipid-dependent channel activity Nature Communications 14(1) (2023)
Goretzki B, Wiedemann C, McCray B, Schäfer S, Jansen J, Tebbe F, Mitrovic S, Nöth J, Cabezudo A, Donohue J, Jeffries C, Steinchen W, Stengel F, Sumner C, Hummer G, Hellmich U

R_g^Guinier	3.2	nm
D_max	14.5	nm
Volume^Porod	59	nm³

SASDQN8 – G. gallus TRPV4 intrinsically disordered N-terminus, mutation 107-KRWRR-111 to 107-AAWAA-111

G. gallus TRPV4 intrinsically disordered N-terminus, mutation 107-KRWRR-111 to 107-AAWAA-111 Rg histogram

Sample:	Transient receptor potential cation channel subfamily V member 4 monomer, 14 kDa Gallus gallus protein
Buffer:	20 mM Tris, 100 mM NaCl, 10 mM DTT, pH: 7
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2019 Dec 16

R_g^Guinier	3.3	nm
D_max	14.5	nm
Volume^Porod	37	nm³

SASDQA8 – Rap guanine nucleotide exchange factor Epac1

Rap guanine nucleotide exchange factor 3 experimental SAS data

Rap guanine nucleotide exchange factor 3 Kratky plot

Sample:	Rap guanine nucleotide exchange factor 3 monomer, 82 kDa Homo sapiens protein
Buffer:	20 mM Tris pH 8.0, 150 mM NaCl, 0.5 mM EDTA, pH: 8
Experiment:	SAXS data collected at SWING, SOLEIL on 2017 Oct 4

Membranes prime the RapGEF EPAC1 to transduce cAMP signaling Nature Communications 14(1) (2023)
Sartre C, Peurois F, Ley M, Kryszke M, Zhang W, Courilleau D, Fischmeister R, Ambroise Y, Zeghouf M, Cianferani S, Ferrandez Y, Cherfils J

R_g^Guinier	3.2	nm
D_max	10.7	nm
Volume^Porod	130	nm³

SASDQB8 – Rap guanine nucleotide exchange factor Epac1 with cAMP

Sample:	Rap guanine nucleotide exchange factor 3 monomer, 82 kDa Homo sapiens protein
Buffer:	20 mM Tris pH 8.0, 150 mM NaCl, 0.5 mM EDTA, pH: 8
Experiment:	SAXS data collected at SWING, SOLEIL on 2017 Oct 4

R_g^Guinier	3.5	nm
D_max	13.0	nm
Volume^Porod	140	nm³

SASDQC8 – Rap guanine nucleotide exchange factor Epac1 with CE3F4 inhibitor

Sample:	Rap guanine nucleotide exchange factor 3 monomer, 82 kDa Homo sapiens protein
Buffer:	20 mM Tris pH 8.0, 150 mM NaCl, 0.5 mM EDTA, pH: 8
Experiment:	SAXS data collected at SWING, SOLEIL on 2017 Oct 4

R_g^Guinier	3.3	nm
D_max	11.4	nm
Volume^Porod	140	nm³

SASDQD8 – Rap guanine nucleotide exchange factor Epac1 with cAMP and CE3F4 inhibitor

Sample:	Rap guanine nucleotide exchange factor 3 monomer, 82 kDa Homo sapiens protein
Buffer:	20 mM Tris pH 8.0, 150 mM NaCl, 0.5 mM EDTA, pH: 8
Experiment:	SAXS data collected at SWING, SOLEIL on 2017 Oct 4

R_g^Guinier	3.3	nm
D_max	11.8	nm
Volume^Porod	134	nm³

SASDPV7 – FAD-dependent monooxygenase from Stenotrophomonas maltophilia (no reducing agent)

Monooxygenase (M154I, A283T) experimental SAS data

Sample:	Monooxygenase (M154I, A283T) monomer, 39 kDa Stenotrophomonas maltophilia protein
Buffer:	25 mM Bis-Tris, 150 mM NaCl, pH: 6.5
Experiment:	SAXS data collected at Anton Paar SAXSpoint 2.0, Institute of Biotechnology, Czech Academy of Sciences/Centre of Molecular Structure on 2022 Jan 10

Tetracycline-modifying enzyme Sm TetX from Stenotrophomonas maltophilia Acta Crystallographica Section F Structural Biology Communications 79(7):180-192 (2023)
Malý M, Kolenko P, Stránský J, Švecová L, Dušková J, Koval' T, Skálová T, Trundová M, Adámková K, Černý J, Božíková P, Dohnálek J

R_g^Guinier	2.4	nm
D_max	6.8	nm
Volume^Porod	59	nm³

SASDPW7 – FAD-dependent monooxygenase from Stenotrophomonas maltophilia (with reducing agent)

Sample:	Monooxygenase (M154I, A283T) monomer, 39 kDa Stenotrophomonas maltophilia protein
Buffer:	25 mM Bis-Tris, 150 mM NaCl, 30 mM DTT, pH: 6.5
Experiment:	SAXS data collected at Anton Paar SAXSpoint 2.0, Institute of Biotechnology, Czech Academy of Sciences/Centre of Molecular Structure on 2022 Jan 7

R_g^Guinier	2.4	nm
D_max	6.4	nm
Volume^Porod	64	nm³

SASDLK7 – Bartonella effector protein (Bep1), 15 °C

Bartonella effector protein (Bep) substrate of VirB T4SS experimental SAS data

Sample:	Bartonella effector protein (Bep) substrate of VirB T4SS monomer, 64 kDa Bartonella clarridgeiae (strain … protein
Buffer:	25 mM Hepes, 300 mM NaCl, 1 mM TCEP, 5% v/v glycerol, pH: 7.5
Experiment:	SAXS data collected at Xenocs Xeuss 2.0 Q-Xoom, Center for Structural Studies, Heinrich-Heine-University on 2020 May 29

Structure and function of Bartonella effector protein 1: target and interdomain interactions University of Basel PhD thesis 15051 (2023)
Markus Huber, Jens Reiners

R_g^Guinier	4.1	nm
D_max	13.4	nm
Volume^Porod	83	nm³

SASDLL7 – Bartonella effector protein (Bep1), 20 °C

Sample:	Bartonella effector protein (Bep) substrate of VirB T4SS monomer, 64 kDa Bartonella clarridgeiae (strain … protein
Buffer:	25 mM Hepes, 300 mM NaCl, 1 mM TCEP, 5% v/v glycerol, pH: 7.5
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Jun 26

Structure and function of Bartonella effector protein 1: target and interdomain interactions University of Basel PhD thesis 15051 (2023)
Markus Huber, Jens Reiners

R_g^Guinier	3.8	nm
D_max	13.4	nm
Volume^Porod	87	nm³

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