Curated repository for small angle scattering data and models


SASBDB currently contains:


832

experimental data sets

1260

models
180 experimental data sets on hold
225 models on hold

Small angle scattering (SAS) of X-ray and neutrons provides structural information on biological macromolecules in solution at a resolution of 1-2 nm.
SASBDB is a fully searchable curated repository of freely accessible and downloadable experimental data, which are deposited together with the relevant experimental conditions, sample details, derived models and their fits to the data.

Recent depositions:

SASDEM4 – HrpG/HrpV/HrpJ gatekeeper complex from Erwinia amylovora

Type III secretion protein HrpGType III secretion protein HrpVHypersensitivity response secretion protein HrpJ experimental SAS data
CORAL model
Sample: Type III secretion protein HrpG, 19 kDa Erwinia amylovora (strain ... protein
Type III secretion protein HrpV, 13 kDa Erwinia amylovora (strain ... protein
Hypersensitivity response secretion protein HrpJ, 42 kDa Erwinia amylovora (strain ... protein
Buffer: 20mM Tris-Cl, pH 8.0, 100mM NaCl, 2mM DTT, 0.5mM EDTA, pH: 8
Experiment: SAXS data collected at SWING, SOLEIL on 2016 Apr 3
Migration of Type III Secretion System Transcriptional Regulators Links Gene Expression to Secretion. MBio 9(4) (2018)
Charova SN, Gazi AD, Mylonas E, Pozidis C, Sabarit B, Anagnostou D, Psatha K, Aivaliotis M, Beuzon CR, Panopoulos NJ, Kokkinidis M
RgGuinier 4.0 nm
Dmax 16.0 nm

SASDD79 – High load concentration of alpha-aminoadipic semialdehyde dehydrogenase ALDH7A1 with nicotinamide adenine dinucleotide (NAD) collected by SEC-SAXS
Alpha-aminoadipic semialdehyde dehydrogenase experimental SAS data
PDB model
NAD+ Promotes Assembly of the Active Tetramer of Aldehyde Dehydrogenase 7A1.
SASDDA5 – Neurexin 1a L5L6 with ss6 insert
Neurexin 1a L5L6 with ss6 insert experimental SAS data
Neurexin 1a L5L6 with ss6 insert Rg histogram
Structural Plasticity of Neurexin 1α: Implications for its Role as Synaptic Organizer
SASDDP9 – C-terminal half of pseudorabies virus tegument protein UL37
Tegument protein UL37 experimental SAS data
DAMMIN model
The dynamic nature of the conserved tegument protein UL37 of herpesviruses.
SASDCH9 – Bifunctional enzyme responsible for the synthesis and hydrolysis of c-di-GMP (DcpA) with GDP
Sensory box/response regulator experimental SAS data
CORAL model
The GDP-switched GAF domain of DcpA modulates the concerted synthesis/hydrolysis of c-di-GMP in Mycobacterium smegmatis
SASDDJ9 – Conformation of the R1-3 human dystrophin fragment (SANS)
R1-3 human dystrophin fragment experimental SAS data
YASARA model
Human dystrophin structural changes upon binding to anionic membrane lipids

Browse the contents according to:

Organism
Macromolecule type
Model type
Dissemination type