Curated repository for small angle scattering data and models


SASBDB currently contains:


870

experimental data sets

1322

models
240 experimental data sets on hold
297 models on hold

Small angle scattering (SAS) of X-ray and neutrons provides structural information on biological macromolecules in solution at a resolution of 1-2 nm.
SASBDB is a fully searchable curated repository of freely accessible and downloadable experimental data, which are deposited together with the relevant experimental conditions, sample details, derived models and their fits to the data.

Recent depositions:

SASDDB8 – Periplasmic domain of inner membrane protein GspL, dimer

Type II secretion system protein L, periplasmic domain experimental SAS data
EOM/RANCH model
Sample: Type II secretion system protein L, periplasmic domain dimer, 28 kDa Pseudomonas aeruginosa protein
Buffer: 50 mM TRIS, 100 mM NaCl, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2016 Apr 8
Structure and oligomerization of the periplasmic domain of GspL from the type II secretion system of Pseudomonas aeruginosa Scientific Reports 8(1) (2018)
Fulara A, Vandenberghe I, Read R, Devreese B, Savvides S
RgGuinier 2.2 nm
Dmax 7.5 nm

SASDE35 – Ovalbumin monomer from in-house SEC-SAXS
Ovalbumin experimental SAS data
PDB model
Size-exclusion chromatography small-angle X-ray scattering of water soluble proteins on a laboratory instrument
SASDEQ7 – Filamin A Ig-like domains 3-5 (FLNa3-5)
Filamin A Ig-like domains 3-5 experimental SAS data
PDB model
Non-syndromic Mitral Valve Dysplasia Mutation Changes the Force Resilience and Interaction of Human Filamin A.
SASDEN4 – Protein tyrosine phosphatase SHP2
Tyrosine-protein phosphatase non-receptor type 11 experimental SAS data
ALLOSMOD model
Mechanism of activating mutations and allosteric drug inhibition of the phosphatase SHP2
SASDD76 – Phox Homologue (PX) - C2 domains of human phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha (PI3KC2α) in complex with inositol-hexaphosphate (IP6)
Phox Homology (PX) - C2 domains of human Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha experimental SAS data
DAMFILT model
Molecular Basis for Membrane Recruitment by the PX and C2 Domains of Class II Phosphoinositide 3-Kinase-C2α.
SASDDM6 – Calbindin-D28K
Calbindin experimental SAS data
DAMMIF model
The X-ray structure of human calbindin-D28K: an improved model

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