Curated repository for small angle scattering data and models


SASBDB currently contains:


258

experimental data sets

399

models
99 experimental data sets on hold
148 models on hold

Small angle scattering (SAS) of X-ray and neutrons provides structural information on biological macromolecules in solution at a resolution of 1-2 nm.
SASBDB is a fully searchable curated repository of freely accessible and downloadable experimental data, which are deposited together with the relevant experimental conditions, sample details, derived models and their fits to the data.

Recent depositions:

SASDAC6 – PsrP functional binding region

Functional binding region (187-385) of the pneumococcal serine-rich repeat protein experimental SAS data
EOM model
Sample: Functional binding region (187-385) of the pneumococcal serine-rich repeat protein monomer, Streptococcus pneumoniae protein
Buffer: PBS, pH: 7.4
Experiment: SAXS data collected at BM29, ESRF 2013-Feb-27
The BR domain of PsrP interacts with extracellular DNA to promote bacterial aggregation; structural insights into pneumococcal biofilm formation. Sci Rep 2016 Sep 1;6:32371
Schulte T, Mikaelsson C, Beaussart A, Kikhney A, Deshmukh M, Wolniak S, Pathak A, Ebel C, Löfling J, Fogolari F, Henriques-Normark B, Dufrêne YF, Svergun D, Nygren PÅ, Achour A
RgGuinier 2.0 nm
Dmax 7.8 nm
VolumePorod 38 nm3

SASDB52 – Death associated protein kinase (wild-type)
Death associated protein kinase wild-type experimental SAS data
OLIGOMER model
Death-Associated Protein Kinase Activity Is Regulated by Coupled Calcium/Calmodulin Binding to Two Distinct Sites
SASDBL3 – Highly similar to Actin cross-linking family protein 7 (ACF7) Homo Sapiens
cDNA FLJ45612 fis, clone BRTHA3025073, highly similar to Actin cross-linking family protein 7 experimental SAS data
cDNA FLJ45612 fis, clone BRTHA3025073, highly similar to Actin cross-linking family protein 7 Kratky plot
In vivo epidermal migration requires focal adhesion targeting of ACF7.
SASDBY3 – Aureochrome 1a bZIP-LOV module: PtAUREO1a bZIP-LOV (Light oxygen voltage) module (light state-TBE)
Aureochrome 1a bZIP-LOV module experimental SAS data
DAMFILT model
Allosteric communication between DNA-binding and light-responsive domains of diatom class I aureochromes.
SASDBA5 – Cyclohexanone monooxygenase, wild-type
Cyclohexanone monooxygenase experimental SAS data
Cyclohexanone monooxygenase Kratky plot
The Role of Conformational Flexibility in Baeyer-Villiger Monooxygenase Catalysis and Structure.
SASDAY7 – IL-6R tetramer-dimer equilibrium
Interleukin-6 receptor subunit alphaInterleukin-6 receptor subunit alpha experimental SAS data
CORAL model
Structure and target interaction of a G-quadruplex RNA-aptamer.

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