Small Angle Scattering Biological Data Bank SASBDB

SASDV98 – Full-length N(5)-hydroxyornithine:cis-anhydromevalonyl coenzyme A-N(5)-transacylase sidF

N(5)-hydroxyornithine:cis-anhydromevalonyl coenzyme A-N(5)-transacylase sidF experimental SAS data

Full-length N(5)-hydroxyornithine:cis-anhydromevalonyl coenzyme A-N(5)-transacylase sidF Rg histogram

Sample:	N(5)-hydroxyornithine:cis-anhydromevalonyl coenzyme A-N(5)-transacylase sidF tetramer, 223 kDa Aspergillus fumigatus (strain … protein
Buffer:	50 mM Tris, 200 mM NaCl, pH: 8
Experiment:	SAXS data collected at Anton Paar SAXSpoint 2.0, Institute of Biotechnology, Czech Academy of Sciences/Centre of Molecular Structure on 2022 Jul 7

SidF, a dual substrate N5-acetyl-N5-hydroxy-L-ornithine transacetylase involved in Aspergillus fumigatus siderophore biosynthesis Journal of Structural Biology: X 11:100119 (2025)
Poonsiri T, Stransky J, Demitri N, Haas H, Cianci M, Benini S

R_g^Guinier	4.0	nm
D_max	19.0	nm
Volume^Porod	412	nm³

SASDVA8 – The N-terminal domain of N(5)-hydroxyornithine:cis-anhydromevalonyl coenzyme A-N(5)-transacylase sidF

The N-terminal domain of N(5)-hydroxyornithine:cis-anhydromevalonyl coenzyme A-N(5)-transacylase sidF Rg histogram

Sample:	N(5)-hydroxyornithine:cis-anhydromevalonyl coenzyme A-N(5)-transacylase sidF monomer, 25 kDa Aspergillus fumigatus (strain … protein
Buffer:	50 mM Tris, 200 mM NaCl, pH: 8
Experiment:	SAXS data collected at Anton Paar SAXSpoint 2.0, Institute of Biotechnology, Czech Academy of Sciences/Centre of Molecular Structure on 2023 Jan 18

R_g^Guinier	2.2	nm
D_max	8.9	nm
Volume^Porod	30	nm³

SASDVB8 – C-terminal truncation mutant of N(5)-hydroxyornithine:cis-anhydromevalonyl coenzyme A-N(5)-transacylase sidF

N(5)-hydroxyornithine:cis-anhydromevalonyl coenzyme A-N(5)-transacylase sidF (Δ444-462) experimental SAS data

Sample:	N(5)-hydroxyornithine:cis-anhydromevalonyl coenzyme A-N(5)-transacylase sidF (Δ444-462) dimer, 107 kDa Aspergillus fumigatus (strain … protein
Buffer:	50 mM Tris, 200 mM NaCl, pH: 8
Experiment:	SAXS data collected at Anton Paar SAXSpoint 2.0, Institute of Biotechnology, Czech Academy of Sciences/Centre of Molecular Structure on 2023 Jan 18

R_g^Guinier	3.5	nm
D_max	15.0	nm
Volume^Porod	189	nm³

SASDVD6 – The Ig-like C2-type 4 domain (Ig4WT) of Palladin

Sample:	Palladin monomer, 12 kDa Mus musculus protein
Buffer:	20 mM HEPES pH 7.4, 1 mM DTT, 100 mM NaCl, pH:
Experiment:	SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2023 Aug 29

Integrated structural model of the palladin-actin complex using XL-MS, docking, NMR, and SAXS. Protein Sci 34(5):e70122 (2025)
Sargent R, Liu DH, Yadav R, Glennenmeier D, Bradford C, Urbina N, Beck MR

R_g^Guinier	1.7	nm
D_max	6.8	nm
Volume^Porod	18	nm³

SASDVE6 – The Ig-like C2-type 3 domain (Ig3WT) of Palladin

Sample:	Palladin monomer, 12 kDa Mus musculus protein
Buffer:	20 mM HEPES pH 7.4, 1 mM DTT, 100 mM NaCl, pH:
Experiment:	SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2023 Aug 29

R_g^Guinier	1.6	nm
D_max	6.7	nm
Volume^Porod	18	nm³

SASDVF6 – The Ig-like C2-type 3 and Ig-like C2-type 4 domains (Ig34WT) of Palladin

The Ig-like C2-type 3 and Ig-like C2-type 4 domains (Ig34WT) of Palladin Rg histogram

Sample:	Palladin monomer, 27 kDa Mus musculus protein
Buffer:	20 mM HEPES pH 7.4, 1 mM DTT, 100 mM NaCl, pH:
Experiment:	SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2023 Aug 29

R_g^Guinier	2.8	nm
D_max	12.3	nm
Volume^Porod	29	nm³

SASDRK9 – single self-amplifying RNA

self-amplifying RNA experimental SAS data

Sample:	self-amplifying RNA monomer, 3030 kDa RNA
Buffer:	MBG buffer: 5% w/v D-Glucose, 10mM MES (2-(N-morpholino)ethanesulfonic acid) in double distillated sterile/RNAse free water, pH: 6.1
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2019 Nov 10

Compact polyethylenimine-complexed mRNA molecules as quintessential vaccines
Martin Schroer

R_g^Guinier	90.5	nm
D_max	200.0	nm

SASDRL9 – single self-amplifying RNA + 50 mM NaCl

Sample:	self-amplifying RNA monomer, 3030 kDa RNA
Buffer:	MBG buffer: 5% w/v D-Glucose, 10mM MES (2-(N-morpholino)ethanesulfonic acid) in double distillated sterile/RNAse free water, pH: 6.1
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Mar 10

Compact polyethylenimine-complexed mRNA molecules as quintessential vaccines
Martin Schroer

R_g^Guinier	30.7	nm
D_max	107.4	nm
Volume^Porod	112000	nm³

SASDRM9 – Polyethylenimine-compacted single self-amplifying RNA for prophylactic and therapeutic application, specifically for vaccination

self-amplifying RNAlinear polyethylenimine experimental SAS data

Sample:	self-amplifying RNA monomer, 3030 kDa RNA linear polyethylenimine monomer, 25 kDa none (polymer)
Buffer:	MBG buffer: 5% w/v D-Glucose, 10mM MES (2-(N-morpholino)ethanesulfonic acid) in double distillated sterile/RNAse free water, pH: 6.1
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2019 Nov 10

Compact polyethylenimine-complexed mRNA molecules as quintessential vaccines
Martin Schroer

R_g^Guinier	12.0	nm
D_max	40.0	nm
Volume^Porod	9100	nm³

SASDV74 – Ser48-phosphorylated N-terminal domain of transactive response DNA-binding protein 43 (TDP-43)

TAR DNA-binding protein 43 experimental SAS data

Sample:	TAR DNA-binding protein 43 monomer, 9 kDa Homo sapiens protein
Buffer:	50 mM Tris-HCl, 150 mM NaCl, 1 mM DTT, 3% glycerol,, pH: 8.5
Experiment:	SAXS data collected at BL38B1, SPring-8 on 2024 May 29

Semi-synthesis of TDP-43 reveals the effects of phosphorylation in N-terminal domain on self-association Communications Chemistry 8(1) (2025)
Sasaki D, Tenda M, Sohma Y

R_g^Guinier	1.4	nm
D_max	4.3	nm
Volume^Porod	15	nm³

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4690 hits found.