|
|
|
Sample: |
DNA protection during starvation protein dodecamer, 224 kDa Escherichia coli (strain … protein
|
Buffer: |
50 mM NaCl, 0.5 mM EDTA, 50 mM Tris-HCl, pH: 8
|
Experiment: |
SAXS
data collected at EMBL P12, PETRA III on 2021 Oct 5
|
Anomalous small-angle X-ray scattering study of the formation of iron clusters in the inner cavity of the ferritin-like protein Dps
|
RgGuinier |
3.8 |
nm |
Dmax |
14.0 |
nm |
VolumePorod |
32 |
nm3 |
|
|
|
|
|
Sample: |
DNA protection during starvation protein dodecamer, 224 kDa Escherichia coli (strain … protein
|
Buffer: |
50 mM NaCl, 0.5 mM EDTA, 50 mM Tris-HCl, pH: 8
|
Experiment: |
SAXS
data collected at EMBL P12, PETRA III on 2021 Oct 5
|
Anomalous small-angle X-ray scattering study of the formation of iron clusters in the inner cavity of the ferritin-like protein Dps
Alexander Gordienko
|
RgGuinier |
7.4 |
nm |
Dmax |
12.0 |
nm |
|
|
|
|
|
Sample: |
DNA protection during starvation protein dodecamer, 224 kDa Escherichia coli (strain … protein
|
Buffer: |
50 mM NaCl, 0.5 mM EDTA, 50 mM Tris-HCl, pH: 8
|
Experiment: |
SAXS
data collected at EMBL P12, PETRA III on 2021 Oct 5
|
Anomalous small-angle X-ray scattering study of the formation of iron clusters in the inner cavity of the ferritin-like protein Dps
|
RgGuinier |
7.1 |
nm |
Dmax |
14.0 |
nm |
|
|
|
|
|
Sample: |
Homo sapiens RNA component of 7SK nuclear ribonucleoprotein (RN7SK), small nuclear RNA monomer, 18 kDa Homo sapiens RNA
Protein Tat monomer, 2 kDa Human immunodeficiency virus … protein
|
Buffer: |
10 mM phosphate, 70 mM NaCl, 0.1 mM EDTA, pH: 5.6
|
Experiment: |
SAXS
data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2018 Nov 27
|
A structure-based mechanism for displacement of the HEXIM adapter from 7SK small nuclear RNA.
Commun Biol 5(1):819 (2022)
Pham VV, Gao M, Meagher JL, Smith JL, D'Souza VM
|
RgGuinier |
2.5 |
nm |
Dmax |
9.9 |
nm |
VolumePorod |
28 |
nm3 |
|
|
|
|
|
Sample: |
Homo sapiens RNA component of 7SK nuclear ribonucleoprotein (RN7SK), small nuclear RNA monomer, 18 kDa Homo sapiens RNA
Protein HEXIM1 monomer, 2 kDa Homo sapiens protein
|
Buffer: |
10 mM phosphate, 70 mM NaCl, 0.1 mM EDTA, pH: 5.6
|
Experiment: |
SAXS
data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2018 Nov 27
|
A structure-based mechanism for displacement of the HEXIM adapter from 7SK small nuclear RNA.
Commun Biol 5(1):819 (2022)
Pham VV, Gao M, Meagher JL, Smith JL, D'Souza VM
|
RgGuinier |
2.2 |
nm |
Dmax |
8.2 |
nm |
VolumePorod |
26 |
nm3 |
|
|
|
|
|
Sample: |
Protein Tat monomer, 2 kDa Human immunodeficiency virus … protein
Homo sapiens RNA component of 7SK nuclear ribonucleoprotein (RN7SK), small nuclear RNA monomer, 18 kDa Homo sapiens RNA
|
Buffer: |
10 mM phosphate, 70 mM NaCl, 0.1 mM EDTA, pH: 5.6
|
Experiment: |
SAXS
data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2019 Sep 9
|
A structure-based mechanism for displacement of the HEXIM adapter from 7SK small nuclear RNA.
Commun Biol 5(1):819 (2022)
Pham VV, Gao M, Meagher JL, Smith JL, D'Souza VM
|
RgGuinier |
2.3 |
nm |
Dmax |
9.7 |
nm |
VolumePorod |
28 |
nm3 |
|
|
|
|
|
Sample: |
DNA repair protein complementing XP-A cells monomer, 27 kDa Homo sapiens protein
Replication protein A 70 kDa DNA-binding subunit monomer, 49 kDa Homo sapiens protein
Replication protein A 32 kDa subunit monomer, 25 kDa Homo sapiens protein
Replication protein A 14 kDa subunit monomer, 14 kDa Homo sapiens protein
3-prime ss-ds DNA junction NER model substrate monomer, 17 kDa DNA
|
Buffer: |
20 mM Tris pH 8.0, 150 mM NaCl, 2% glycerol, 1 mM DTT, pH: 8
|
Experiment: |
SAXS
data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2020 Mar 4
|
Two interaction surfaces between XPA and RPA organize the preincision complex in nucleotide excision repair
Proceedings of the National Academy of Sciences 119(34) (2022)
Kim M, Kim H, D’Souza A, Gallagher K, Jeong E, Topolska-Wós A, Ogorodnik Le Meur K, Tsai C, Tsai M, Kee M, Tainer J, Yeo J, Chazin W, Schärer O
|
RgGuinier |
4.3 |
nm |
Dmax |
14.7 |
nm |
VolumePorod |
189 |
nm3 |
|
|
|
|
|
Sample: |
Replication protein A 14 kDa subunit monomer, 14 kDa Homo sapiens protein
DNA repair protein complementing XP-A cells monomer, 27 kDa Homo sapiens protein
Replication protein A 70 kDa DNA-binding subunit monomer, 49 kDa Homo sapiens protein
Replication protein A 32 kDa subunit monomer, 25 kDa Homo sapiens protein
5-prime ss-ds DNA junction NER model substrate monomer, 17 kDa DNA
|
Buffer: |
20 mM Tris pH 8.0, 150 mM NaCl, 2% glycerol, 1 mM DTT, pH: 8
|
Experiment: |
SAXS
data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2020 Mar 4
|
Two interaction surfaces between XPA and RPA organize the preincision complex in nucleotide excision repair
Proceedings of the National Academy of Sciences 119(34) (2022)
Kim M, Kim H, D’Souza A, Gallagher K, Jeong E, Topolska-Wós A, Ogorodnik Le Meur K, Tsai C, Tsai M, Kee M, Tainer J, Yeo J, Chazin W, Schärer O
|
RgGuinier |
4.6 |
nm |
Dmax |
16.5 |
nm |
VolumePorod |
220 |
nm3 |
|
|
|
|
|
Sample: |
Retinoblastoma-associated protein monomer, 41 kDa Homo sapiens protein
|
Buffer: |
20 mM sodium phosphate pH 7.0, 200 mM NaCl, 1mM DTT, pH: 7
|
Experiment: |
SAXS
data collected at EMBL P12, PETRA III on 2018 Jul 14
|
Conformational buffering underlies functional selection in intrinsically disordered protein regions.
Nat Struct Mol Biol (2022)
González-Foutel NS, Glavina J, Borcherds WM, Safranchik M, Barrera-Vilarmau S, Sagar A, Estaña A, Barozet A, Garrone NA, Fernandez-Ballester G, Blanes-Mira C, Sánchez IE, de Prat-Gay G, Cortés J, Bern...
|
RgGuinier |
2.4 |
nm |
Dmax |
7.4 |
nm |
VolumePorod |
66 |
nm3 |
|
|
|
|
|
Sample: |
Retinoblastoma-associated protein monomer, 41 kDa Homo sapiens protein
|
Buffer: |
20 mM sodium phosphate pH 7.0, 200 mM NaCl, 1mM DTT, pH: 7
|
Experiment: |
SAXS
data collected at EMBL P12, PETRA III on 2018 Jul 14
|
Conformational buffering underlies functional selection in intrinsically disordered protein regions.
Nat Struct Mol Biol (2022)
González-Foutel NS, Glavina J, Borcherds WM, Safranchik M, Barrera-Vilarmau S, Sagar A, Estaña A, Barozet A, Garrone NA, Fernandez-Ballester G, Blanes-Mira C, Sánchez IE, de Prat-Gay G, Cortés J, Bern...
|
RgGuinier |
2.5 |
nm |
Dmax |
7.9 |
nm |
VolumePorod |
64 |
nm3 |
|
|