The internal interaction in RBBP5 regulates assembly and activity of MLL1 methyltransferase complex.

Han J Li T, Li Y, Li M, Wang X, Peng C, Su C, Li N, Li Y, Xu Y, Chen Y, Nucleic Acids Res (2019) Europe PMC

SASDGD4 – Mixed lineage leukemia protein-1 complex, MLL1-WDR5-ASH2L-RBBP5(2-381)

Retinoblastoma-binding protein 5
Histone-lysine N-methyltransferase 2A
WD repeat-containing protein 5
Set1/Ash2 histone methyltransferase complex subunit ASH2
MWexperimental 170 kDa
MWexpected 162 kDa
VPorod 360 nm3
log I(s) 6.86×10-2 6.86×10-3 6.86×10-4 6.86×10-5
Retinoblastoma-binding protein 5 Histone-lysine N-methyltransferase 2A WD repeat-containing protein 5 Set1/Ash2 histone methyltransferase complex subunit ASH2 small angle scattering data  s, nm-1
ln I(s)
Retinoblastoma-binding protein 5 Histone-lysine N-methyltransferase 2A WD repeat-containing protein 5 Set1/Ash2 histone methyltransferase complex subunit ASH2 Guinier plot ln 6.86×10-2 Rg: 5.7 nm 0 (5.7 nm)-2 s2
(sRg)2I(s)/I(0)
Retinoblastoma-binding protein 5 Histone-lysine N-methyltransferase 2A WD repeat-containing protein 5 Set1/Ash2 histone methyltransferase complex subunit ASH2 Kratky plot 1.104 0 3 sRg
p(r)
Retinoblastoma-binding protein 5 Histone-lysine N-methyltransferase 2A WD repeat-containing protein 5 Set1/Ash2 histone methyltransferase complex subunit ASH2 pair distance distribution function Rg: 5.7 nm 0 Dmax: 18.6 nm

Data validation


There are no models related to this curve.

Synchrotron SAXS data from solutions of MLL1-WDR5-ASH2L-RBBP5(2-381) in 300 mM NaCl, 25mM Tris-HCl, 4% glycerol, 1 mM TCEP, pH 8 were collected on the BL19U2 beam line at the Shanghai Synchrotron Radiation Facility (SSRF; Shanghai, China) using a Pilatus 1M detector at a sample-detector distance of 2.4 m and at a wavelength of λ = 0.0918 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). One solute concentration of 2.00 mg/ml was measured at 10°C. 20 successive 1 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.

Retinoblastoma-binding protein 5 (RBBP5)
Mol. type   Protein
Organism   Homo sapiens
Olig. state   Monomer
Mon. MW   42.4 kDa
 
UniProt   Q15291 (2-381)
Sequence   FASTA
 
Histone-lysine N-methyltransferase 2A (MLL1)
Mol. type   Protein
Organism   Homo sapiens
Olig. state   Monomer
Mon. MW   24.9 kDa
 
UniProt   Q03164 (3754-3969)
Sequence   FASTA
 
WD repeat-containing protein 5 (WDR5)
Mol. type   Protein
Organism   Homo sapiens
Olig. state   Monomer
Mon. MW   34.3 kDa
 
UniProt   P61964 (23-334)
Sequence   FASTA
 
Set1/Ash2 histone methyltransferase complex subunit ASH2 (ASH2L)
Mol. type   Protein
Organism   Homo sapiens
Olig. state   Monomer
Mon. MW   60.2 kDa
 
UniProt   Q9UBL3-3 (1-534)
Sequence   FASTA