Comparative analysis of heparine oligosaccharides, heparin and heparan sulphate

Adriana Erica Miele.

SASDNC4 – Heparin oligosaccharide in 50 mM Tris/HCl pH 7.4, 2.5 mg/mL

Heparin
MWI(0) 16 kDa
MWexpected 14 kDa
log I(s) 3.59×10-2 3.59×10-3 3.59×10-4 3.59×10-5
Heparin small angle scattering data  s, nm-1
ln I(s)
Heparin Guinier plot ln 3.59×10-2 Rg: 4.8 nm 0 (4.8 nm)-2 s2
(sRg)2I(s)/I(0)
Heparin Kratky plot 1.104 0 3 sRg
p(r)
Heparin pair distance distribution function Rg: 5.4 nm 0 Dmax: 23.9 nm

Data validation


There are no models related to this curve.

Synchrotron SAXS data from solutions of Heparin oligosaccharide in 50 mM Tris/HCl, pH 7.4 were collected on the SWING beam line at the SOLEIL storage ring (Saint-Aubin, France) using a Eiger 4M detector at a sample-detector distance of 2 m and at a wavelength of λ = 10.33 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). One solute concentration of 2.50 mg/ml was measured at 20°C. 20 successive 0.500 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.

High grade unfractionated Heparin is a glycosaminoglycan polymer with a high degree of sulfation. Although the main disaccharide in heparin is the trisulphated unit GlcNS,6S – IdoA,2S heparin also contains di-, mono- and non-sulphated units; thus each size class of oligosaccharide, though substantially homogeneous in molecular size, contains structures that vary in content and pattern of sulphation.

Heparin (HP)
Mol. type   Other
Organism   Sus scrofa domesticus
Olig. state   Monomer
Mon. MW   14 kDa
Chemical formula