Comparative analysis of heparine oligosaccharides, heparin and heparan sulphate

Adriana Erica Miele.

SASDNL4 – Heparan sulphate isolated from porcine mucosa in 50 mM Tris/HCl pH 7.4, 1.25 mg/mL

Heparan sulphate oligomer
MWI(0) 12 kDa
MWexpected 20 kDa
log I(s) 1.56×10-2 1.56×10-3 1.56×10-4 1.56×10-5
Heparan sulphate oligomer small angle scattering data  s, nm-1
ln I(s)
Heparan sulphate oligomer Guinier plot ln 1.56×10-2 Rg: 3.2 nm 0 (3.2 nm)-2 s2
(sRg)2I(s)/I(0)
Heparan sulphate oligomer Kratky plot 1.104 0 3 sRg
p(r)
Heparan sulphate oligomer pair distance distribution function Rg: 5.9 nm 0 Dmax: 29.6 nm

Data validation


There are no models related to this curve.

Synchrotron SAXS data from solutions of Heparan sulphate isolated from porcine mucosa in 50 mM Tris/HCl, pH 7.4 were collected on the SWING beam line at the SOLEIL storage ring (Saint-Aubin, France) using a Eiger 4M detector at a sample-detector distance of 2 m and at a wavelength of λ = 0.1 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). One solute concentration of 1.25 mg/ml was measured at 20°C. 20 successive 0.500 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.

Heparan sulphate isolated from porcine mucosa. This material contains both high and low sulphated species of HS and gives a bimodal molecular weight profile with fractions of approx. 40 kDa and 9 kDa; the smaller of the two fractions is the more sulphated component.

Heparan sulphate oligomer (HS)
Mol. type   Other
Organism   Sus scrofa domesticus
Olig. state   Monomer
Mon. MW   20 kDa