MHV Coronavirus Packaging Signal RNA and N protein

Suzette Pabit.

SASDPV5 – Murine hepatitis virus (MHV) coronavirus putative packaging signal RNA (SEC-SAXS)

MHV coronavirus putative packaging signal RNA
MWexperimental 30 kDa
MWexpected 31 kDa
VPorod 55 nm3
log I(s) 1.43×10-2 1.43×10-3 1.43×10-4 1.43×10-5
MHV coronavirus putative packaging signal RNA small angle scattering data  s, nm-1
ln I(s)
MHV coronavirus putative packaging signal RNA Guinier plot ln 1.43×10-2 Rg: 3.9 nm 0 (3.9 nm)-2 s2
(sRg)2I(s)/I(0)
MHV coronavirus putative packaging signal RNA Kratky plot 1.104 0 3 sRg
p(r)
MHV coronavirus putative packaging signal RNA pair distance distribution function Rg: 4.1 nm 0 Dmax: 12.3 nm

Data validation


There are no models related to this curve.

Synchrotron SAXS data from solutions of MHV coronavirus putative packaging signal RNA in 70 mM KCl, 50 μM EDTA, 25 mM HEPES, pH 7 were collected on the BioCAT 18ID beam line at the Advanced Photon Source (APS), Argonne National Laboratory (Lemont, IL, USA) using a Pilatus3 X 1M detector at a sample-detector distance of 3.7 m and at a wavelength of λ = 0.1033 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). In-line size-exclusion chromatography (SEC) SAS was employed. The SEC parameters were as follows: A 75.00 μl sample at 6.2 mg/ml was injected at a 0.60 ml/min flow rate onto a GE Superdex 200 Increase 10/300 column at 22°C. 1750 successive 0.500 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.

MHV coronavirus putative packaging signal RNA (MHV-PS-RNA)
Mol. type   RNA
Organism   Murine coronavirus
Olig. state   Monomer
Mon. MW   31.5 kDa
Sequence   FASTA