Structural dynamics of IDR interactions in human SFPQ and implications for liquid-liquid phase separation

Heidar Koning.

SASDV59 – Human Splicing factor, proline- and glutamine-rich protein 5% SFPQ and 95% dSFPQ at a D2O matchpoint of 95%

Splicing factor, proline- and glutamine-rich
MWexperimental 41 kDa
MWexpected 153 kDa
VPorod 181 nm3
log I(s) 2.85×10-2 2.85×10-3 2.85×10-4 2.85×10-5
Splicing factor, proline- and glutamine-rich small angle scattering data  s, nm-1
ln I(s)
Splicing factor, proline- and glutamine-rich Guinier plot ln 2.85×10-2 Rg: 6.1 nm 0 (6.1 nm)-2 s2
(sRg)2I(s)/I(0)
Splicing factor, proline- and glutamine-rich Kratky plot 1.104 0 3 sRg
p(r)
Splicing factor, proline- and glutamine-rich pair distance distribution function Rg: 6.6 nm 0 Dmax: 22 nm

Data validation


There are no models related to this curve.

SANS data from solutions of Human Splicing factor, proline- and glutamine-rich protein 5% SFPQ and 95% dSFPQ at a D2O matchpoint of 95% in 150 mM KCl, 0.075% glycerol, 20 mM HEPES, 0.5 mM DTT,, pH 7.4 were collected using a ORDELA/21000N detector at a sample-detector distance of 1.3 m and at a wavelength of λ = 0.6 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). at 25°C. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.

SANS experiment indicating dimer partner exchange between deuterated and protiated monomers of full-length SFPQ. Contrast-matching has ensured signal is coming from protiated monomers of full-length SFPQ. Additional details are available in the manuscript: Structural dynamics of IDR interactions in human SFPQ and implications for liquid-liquid phase separation.

Splicing factor, proline- and glutamine-rich (SFPQ cysteine dimer)
Mol. type   Protein
Organism   Homo sapiens
Olig. state   Dimer
Mon. MW   76.3 kDa
 
UniProt   P23246 (214-707)
Sequence   FASTA