Molecular Insights on the Assembling of ParB1 and ParB1- parS1 Partition Complex

Anu A, Lata S, Chaudhuri B, ACS Bio & Med Chem Au (2026) DOI

SASDVQ3 – Truncation variant (amino acids 39-231) of Probable chromosome-partitioning protein ParB (vcParB1trunc I)

Probable chromosome-partitioning protein ParB
MWexperimental 29 kDa
MWexpected 24 kDa
VPorod 55 nm3
log I(s) 6.93×100 6.93×10-1 6.93×10-2 6.93×10-3
Probable chromosome-partitioning protein ParB small angle scattering data  s, nm-1
ln I(s)
Probable chromosome-partitioning protein ParB Guinier plot ln 6.94×100 Rg: 2.7 nm 0 (2.7 nm)-2 s2
(sRg)2I(s)/I(0)
Probable chromosome-partitioning protein ParB Kratky plot 1.104 0 3 sRg
p(r)
Probable chromosome-partitioning protein ParB pair distance distribution function Rg: 2.7 nm 0 Dmax: 9.9 nm

Data validation


There are no models related to this curve.

Synchrotron SAXS data from solutions of Truncation variant (amino acids 39-231) of Probable chromosome-partitioning protein ParB (vcParB1trunc I) in 20 mM Tris pH 7.5, 100 mM NaCl, 5% glycerol, 1mM EDTA, 5 mM BME, 5 mM MgCl2 were collected on the BM29 beam line at the ESRF storage ring (Grenoble, France) using a Pilatus 1M detector at a sample-detector distance of 2.8 m and at a wavelength of λ = 0.0999 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). In-line size-exclusion chromatography (SEC) SAS was employed. The SEC parameters were as follows: A 100.00 μl sample at 9.2 mg/ml was injected at a 0.07 ml/min flow rate onto a GE Superdex 200 Increase 3.2/300 column at 20°C. 1000 successive 2 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.

Truncated form of vcParB1, elution profile I from SEC-SAXS run

Probable chromosome-partitioning protein ParB (vcParB1trunc)
Mol. type   Protein
Organism   Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Olig. state   Monomer
Mon. MW   24.0 kDa
 
UniProt   Q9KNG7 (39-231)
Sequence   FASTA