Schistosoma mansoni Venom Allergen-like protein 13 (SmVAL13) in complex with cognate polyclonal antibody (pAb anti-SmVAL13)

Adriana Erica Miele.

SASDZQ8 – Schistosoma mansoni Venom Allergen-like protein isoform 13 (SmVAL13) in complex with pAb anti-SmVAL13 in ratio 0.5:1 (2nd peak)

Venom allergen-like protein 13
Polyclonal antibody anti-SmVAL13
MWexperimental 125 kDa
MWexpected 167 kDa
VPorod 163 nm3
log I(s) 5.48×100 5.48×10-1 5.48×10-2 5.48×10-3
Venom allergen-like protein 13 Polyclonal antibody anti-SmVAL13 small angle scattering data  s, nm-1
ln I(s)
Venom allergen-like protein 13 Polyclonal antibody anti-SmVAL13 Guinier plot ln 5.49×100 Rg: 4.6 nm 0 (4.6 nm)-2 s2
(sRg)2I(s)/I(0)
Venom allergen-like protein 13 Polyclonal antibody anti-SmVAL13 Kratky plot 1.104 0 3 sRg
p(r)
Venom allergen-like protein 13 Polyclonal antibody anti-SmVAL13 pair distance distribution function Rg: 4.8 nm 0 Dmax: 14.4 nm

Data validation


There are no models related to this curve.

Synchrotron SAXS data from solutions of Schistosoma mansoni Venom Allergen-like protein isoform 13 (SmVAL13) in complex with pAb anti-SmVAL13 in ratio 0.5:1 (2nd peak) in 25 mM MES, 125 mM NaCl, 1 mM EDTA, pH 6.8 were collected on the SWING beam line at the SOLEIL storage ring (Saint-Aubin, France) using a Eiger 4M detector at a sample-detector distance of 2 m and at a wavelength of λ = 0.76 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). In-line size-exclusion chromatography (SEC) SAS was employed. The SEC parameters were as follows: A 45.00 μl sample at 3 mg/ml was injected at a 0.30 ml/min flow rate onto a Cytiva Superdex 200 Increase 3.2/300 column at 20°C. 2600 successive 1 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.

SmVAL13 in complex with its cognate pAb at a 0.5:1 ratio was analyzed by SEC-SAXS. Spectral deconvolution was performed using Evolving Factor Analysis (EFA), revealing two distinct peaks. However, only one peak could be reliably analyzed due to differences in scattering intensity. The present analysis focuses on the second peak.

Venom allergen-like protein 13 (SmVAL13)
Mol. type   Protein
Organism   Schistosoma mansoni
Olig. state   Monomer
Mon. MW   27.2 kDa
 
UniProt   Q1WIQ5 (1-236)
Sequence   FASTA
 
Polyclonal antibody anti-SmVAL13 (pAb anti-SmVAL13)
Mol. type   Protein
Organism   Lagomorph
Olig. state   Monomer
Mon. MW   140 kDa
Sequence   FASTA