Upstream of N-Ras C-terminal cold shock domains mediate poly(A) specificity in a novel RNA recognition mode and bind poly(A) binding protein.

Hollmann NM, Jagtap PKA, Linse JB, Ullmann P, Payr M, Murciano B, Simon B, Hub JS, Hennig J
Nucleic Acids Res (2023 Jan 23)
PMID: 36688322
doi: 10.1093/nar/gkac1277
Submitted to SASBDB: 2020 Feb 27
Published in SASBDB:

SASDHH7 – Upstream of N-ras, isoform A, CSD 7, 8 and 9 from Drosophila melanogaster

Upstream of N-ras, isoform A experimental SAS data
Upstream of N-ras, isoform A Kratky plot
Sample: Upstream of N-ras, isoform A monomer, 26 kDa Drosophila melanogaster protein
Buffer: 20 mM HEPES, 150 mM NaCl, 1 mM DTT, pH: 7.5
Experiment: SAXS data collected at BM29, ESRF on 2017 Jul 19
RgGuinier 2.3 nm
Dmax 9.0 nm
VolumePorod 38 nm3

SASDHL7 – Upstream of N-ras, isoform A, CSD 4 to 9 from Drosophila melanogaster

Upstream of N-ras, isoform A experimental SAS data
Upstream of N-ras, isoform A Kratky plot
Sample: Upstream of N-ras, isoform A monomer, 63 kDa protein
Buffer: 20 mM HEPES, 150 mM NaCl, 1 mM DTT, pH: 7.5
Experiment: SAXS data collected at BM29, ESRF on 2019 Sep 30
RgGuinier 4.9 nm
Dmax 25.0 nm
VolumePorod 136 nm3

SASDHM7 – Upstream of N-ras, isoform A, CSD 1 to 6 from Drosophila melanogaster

Upstream of N-ras, isoform A experimental SAS data
Upstream of N-ras, isoform A Kratky plot
Sample: Upstream of N-ras, isoform A monomer, 57 kDa Drosophila melanogaster protein
Buffer: 20 mM HEPES, 150 mM NaCl, 1 mM DTT, pH: 7.5
Experiment: SAXS data collected at BM29, ESRF on 2017 Sep 30
RgGuinier 4.4 nm
Dmax 20.0 nm
VolumePorod 160 nm3

SASDNN8 – Upstream of N-ras, isoform A, CSD 7, 8 and 9 from Drosophila melanogaster in complex with a poly(A)-15mer RNA

Upstream of N-ras, isoform ApolyA-15mer experimental SAS data
Upstream of N-ras, isoform A polyA-15mer Kratky plot
Sample: Upstream of N-ras, isoform A monomer, 26 kDa Drosophila melanogaster protein
PolyA-15mer monomer, 5 kDa RNA
Buffer: 20 mM HEPES, 150 mM NaCl, 1 mM DTT, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2020 Jun 8
RgGuinier 2.2 nm
Dmax 7.5 nm
VolumePorod 37 nm3