Browse by MACROMOLECULE type: protein

SASDHV5 – Human 4-trimethylaminobutyraldehyde dehydrogenase (ALDH9A1) at 1.25 mg/mL

4-trimethylaminobutyraldehyde dehydrogenase experimental SAS data
OTHER model
Sample: 4-trimethylaminobutyraldehyde dehydrogenase tetramer, 215 kDa Homo sapiens protein
Buffer: 50 mM HEPES, 600 mM NaCl, 2% (v/v) glycerol, 1 mM DTT, 1 mM NAD+, pH: 8
Experiment: SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2019 May 28
Inhibition, crystal structures, and in-solution oligomeric structure of aldehyde dehydrogenase 9A1. Arch Biochem Biophys :108477 (2020)
Wyatt JW, Korasick DA, Qureshi IA, Campbell AC, Gates KS, Tanner JJ
RgGuinier 3.8 nm
Dmax 10.9 nm
VolumePorod 252 nm3

SASDHW5 – Human 4-trimethylaminobutyraldehyde dehydrogenase (ALDH9A1) at 2.5 mg/mL

4-trimethylaminobutyraldehyde dehydrogenase experimental SAS data
OTHER model
Sample: 4-trimethylaminobutyraldehyde dehydrogenase tetramer, 215 kDa Homo sapiens protein
Buffer: 50 mM HEPES, 600 mM NaCl, 2% (v/v) glycerol, 1 mM DTT, 1 mM NAD+, pH: 8
Experiment: SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2019 May 28
Inhibition, crystal structures, and in-solution oligomeric structure of aldehyde dehydrogenase 9A1. Arch Biochem Biophys :108477 (2020)
Wyatt JW, Korasick DA, Qureshi IA, Campbell AC, Gates KS, Tanner JJ
RgGuinier 3.8 nm
Dmax 10.8 nm
VolumePorod 240 nm3

SASDHX5 – Human 4-trimethylaminobutyraldehyde dehydrogenase (ALDH9A1) at 5 mg/mL

4-trimethylaminobutyraldehyde dehydrogenase experimental SAS data
OTHER model
Sample: 4-trimethylaminobutyraldehyde dehydrogenase tetramer, 215 kDa Homo sapiens protein
Buffer: 50 mM HEPES, 600 mM NaCl, 2% (v/v) glycerol, 1 mM DTT, 1 mM NAD+, pH: 8
Experiment: SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2019 May 28
Inhibition, crystal structures, and in-solution oligomeric structure of aldehyde dehydrogenase 9A1. Arch Biochem Biophys :108477 (2020)
Wyatt JW, Korasick DA, Qureshi IA, Campbell AC, Gates KS, Tanner JJ
RgGuinier 3.8 nm
Dmax 10.5 nm
VolumePorod 240 nm3

SASDJE2 – Beta-ketoacyl synthase (Bamb_5925) C-terminal docking domain

Beta-ketoacyl synthase Bamb_5925 experimental SAS data
DAMMIN model
Sample: Beta-ketoacyl synthase Bamb_5925 monomer, 4 kDa Burkholderia ambifaria protein
Buffer: 20 mM Tris-HCl, 200 mM NaCl, 5% glycerol, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2019 Jan 23
Towards improved understanding of intersubunit interactions in modular polyketide biosynthesis: docking in the enacyloxin IIa polyketide synthase. J Struct Biol :107581 (2020)
Risser F, Collin S, Dos Santos-Morais R, Gruez A, Chagot B, Weissman KJ
RgGuinier 1.6 nm
Dmax 6.2 nm
VolumePorod 3 nm3

SASDJF2 – Beta-ketoacyl synthase (Bamb_5924) N-terminal docking domain

Beta-ketoacyl synthase Bamb_5924 experimental SAS data
DAMFILT model
Sample: Beta-ketoacyl synthase Bamb_5924 dimer, 10 kDa Burkholderia ambifaria protein
Buffer: 20 mM Tris-HCl, 200 mM NaCl, 5% glycerol, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2017 Oct 6
Towards improved understanding of intersubunit interactions in modular polyketide biosynthesis: docking in the enacyloxin IIa polyketide synthase. J Struct Biol :107581 (2020)
Risser F, Collin S, Dos Santos-Morais R, Gruez A, Chagot B, Weissman KJ
RgGuinier 1.9 nm
Dmax 7.5 nm
VolumePorod 22 nm3

SASDJG2 – Beta-ketoacyl synthase (Bamb_5920) C-terminal docking domain

Beta-ketoacyl synthase Bamb_5920 experimental SAS data
DAMMIN model
Sample: Beta-ketoacyl synthase Bamb_5920 monomer, 2 kDa Burkholderia ambifaria protein
Buffer: 20 mM Tris-HCl, 200 mM NaCl, 5% glycerol, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2019 Jan 23
Towards improved understanding of intersubunit interactions in modular polyketide biosynthesis: docking in the enacyloxin IIa polyketide synthase. J Struct Biol :107581 (2020)
Risser F, Collin S, Dos Santos-Morais R, Gruez A, Chagot B, Weissman KJ
RgGuinier 1.2 nm
Dmax 4.9 nm
VolumePorod 3 nm3

SASDJH2 – Beta-ketoacyl synthase (Bamb_5924) N-terminal docking domain mutant K32A

Beta-ketoacyl synthase Bamb_5924, K32A mutant experimental SAS data
Beta-ketoacyl synthase Bamb_5924, K32A mutant Kratky plot
Sample: Beta-ketoacyl synthase Bamb_5924, K32A mutant dimer, 10 kDa Burkholderia ambifaria protein
Buffer: 20 mM Tris-HCl, 200 mM NaCl, 5% glycerol, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2019 Jan 23
Towards improved understanding of intersubunit interactions in modular polyketide biosynthesis: docking in the enacyloxin IIa polyketide synthase. J Struct Biol :107581 (2020)
Risser F, Collin S, Dos Santos-Morais R, Gruez A, Chagot B, Weissman KJ
RgGuinier 1.8 nm
Dmax 8.0 nm
VolumePorod 22 nm3

SASDJJ2 – Beta-ketoacyl synthase (Bamb_5924) N-terminal docking domain mutant R17A

Beta-ketoacyl synthase Bamb_5924, R17A mutant experimental SAS data
Beta-ketoacyl synthase Bamb_5924, R17A mutant Kratky plot
Sample: Beta-ketoacyl synthase Bamb_5924, R17A mutant dimer, 10 kDa Burkholderia ambifaria protein
Buffer: 20 mM Tris-HCl, 200 mM NaCl, 5% glycerol, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2019 Jan 23
Towards improved understanding of intersubunit interactions in modular polyketide biosynthesis: docking in the enacyloxin IIa polyketide synthase. J Struct Biol :107581 (2020)
Risser F, Collin S, Dos Santos-Morais R, Gruez A, Chagot B, Weissman KJ
RgGuinier 1.8 nm
Dmax 8.2 nm
VolumePorod 20 nm3

SASDJK2 – Artificial fusion protein of the beta-ketoacyl synthase Bamb_5920 C-terminal docking domain and the beta-ketoacyl synthase Bamb_5919 N-terminal docking domain

Beta-ketoacyl synthase Bamb_5920 CDD/Bamb_5919 NDD artificial protein fusion experimental SAS data
DAMFILT model
Sample: Beta-ketoacyl synthase Bamb_5920 CDD/Bamb_5919 NDD artificial protein fusion dimer, 13 kDa Burkholderia ambifaria protein
Buffer: 20 mM Tris-HCl, 200 mM NaCl, 5% glycerol, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2019 Jan 23
Towards improved understanding of intersubunit interactions in modular polyketide biosynthesis: docking in the enacyloxin IIa polyketide synthase. J Struct Biol :107581 (2020)
Risser F, Collin S, Dos Santos-Morais R, Gruez A, Chagot B, Weissman KJ
RgGuinier 1.8 nm
Dmax 6.0 nm
VolumePorod 25 nm3

SASDJL2 – Artificial fusion protein of the beta-ketoacyl synthase Bamb_5925 C-terminal docking domain and the beta-ketoacyl synthase Bamb_5924 N-terminal docking domain

Beta-ketoacyl synthase Bamb_5925 CDD/Bamb_5924 NDD artificial protein fusion experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Beta-ketoacyl synthase Bamb_5925 CDD/Bamb_5924 NDD artificial protein fusion dimer, 18 kDa Burkholderia ambifaria protein
Buffer: 20 mM Tris-HCl, 200 mM NaCl, 5% glycerol, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2019 Jan 23
Towards improved understanding of intersubunit interactions in modular polyketide biosynthesis: docking in the enacyloxin IIa polyketide synthase. J Struct Biol :107581 (2020)
Risser F, Collin S, Dos Santos-Morais R, Gruez A, Chagot B, Weissman KJ
RgGuinier 2.1 nm
Dmax 9.6 nm
VolumePorod 47 nm3