Browse by MACROMOLECULE type: protein

SASDSN9 – Buffer over-subtracted hen egg white lysozyme in 1 mol% ethylammonium nitrate

Lysozyme C experimental SAS data
Lysozyme C Kratky plot
Sample: Lysozyme C monomer, 14 kDa Gallus gallus protein
Buffer: 1 mol% ethylammonium nitrate, pH: 8
Experiment: SAXS data collected at SAXS/WAXS, Australian Synchrotron on 2019 Nov 27
Scattering approaches to unravel protein solution behaviors in ionic liquids and deep eutectic solvents: From basic principles to recent developments Advances in Colloid and Interface Science :103242 (2024)
Han Q, Veríssimo N, Bryant S, Martin A, Huang Y, Pereira J, Santos-Ebinuma V, Zhai J, Bryant G, Drummond C, Greaves T
RgGuinier 1.6 nm
Dmax 6.2 nm
VolumePorod 28 nm3

SASDSP9 – Buffer under-substracted hen egg white lysozyme in 1mol% ethylammonium nitrate

Lysozyme C experimental SAS data
Lysozyme C Kratky plot
Sample: Lysozyme C monomer, 14 kDa Gallus gallus protein
Buffer: 1 mol% ethylammonium nitrate, pH: 8
Experiment: SAXS data collected at SAXS/WAXS, Australian Synchrotron on 2019 Nov 27
Scattering approaches to unravel protein solution behaviors in ionic liquids and deep eutectic solvents: From basic principles to recent developments Advances in Colloid and Interface Science :103242 (2024)
Han Q, Veríssimo N, Bryant S, Martin A, Huang Y, Pereira J, Santos-Ebinuma V, Zhai J, Bryant G, Drummond C, Greaves T
RgGuinier 1.6 nm
Dmax 6.2 nm
VolumePorod 23 nm3

SASDSW8 – Apo form of vaccinia virus polymerase holoenzyme E9-A20-D4

DNA polymeraseDNA polymerase processivity factor component OPG148Uracil-DNA glycosylase experimental SAS data
DNA polymerase DNA polymerase processivity factor component OPG148 Uracil-DNA glycosylase Kratky plot
Sample: DNA polymerase monomer, 117 kDa Vaccinia virus (strain … protein
DNA polymerase processivity factor component OPG148 monomer, 49 kDa Vaccinia virus (strain … protein
Uracil-DNA glycosylase monomer, 27 kDa Vaccinia virus (strain … protein
Buffer: 200 mM NaCl, 20 mM Tris-HCl and 1 mM TCEP, pH: 8.5
Experiment: SAXS data collected at BM29, ESRF on 2018 Jan 25
Structure and flexibility of the DNA polymerase holoenzyme of vaccinia virus. PLoS Pathog 20(5):e1011652 (2024)
Burmeister WP, Boutin L, Balestra AC, Gröger H, Ballandras-Colas A, Hutin S, Kraft C, Grimm C, Böttcher B, Fischer U, Tarbouriech N, Iseni F
RgGuinier 5.0 nm
Dmax 18.0 nm
VolumePorod 350 nm3

SASDPP7 – Amyloid Beta 1-42 (cluster 1, Set 2, final state)

Amyloid-beta precursor protein experimental SAS data
DAMMIN model
Sample: Amyloid-beta precursor protein, 5 kDa Homo sapiens protein
Buffer: 1 mM Hepes, 0.12 % NH4OH, pH: 10.7
Experiment: SAXS data collected at EMBL P12, PETRA III on 2019 Apr 11
Time-resolved small-angle X-ray scattering study of polymorphic nature of Aß42 oligomerisation
Tia Cheremnykh
RgGuinier 5.8 nm
Dmax 42.0 nm

SASDPQ7 – Amyloid Beta 1-42 (cluster 1, Set 3, final state)

Amyloid-beta precursor protein experimental SAS data
DAMMIN model
Sample: Amyloid-beta precursor protein, 5 kDa Homo sapiens protein
Buffer: 1 mM Hepes, 0.12 % NH4OH, pH: 10.7
Experiment: SAXS data collected at EMBL P12, PETRA III on 2019 Dec 13
Time-resolved small-angle X-ray scattering study of polymorphic nature of Aß42 oligomerisation
Tia Cheremnykh
RgGuinier 6.9 nm
Dmax 60.0 nm

SASDPR7 – Amyloid Beta 1-42 (cluster 2, Set 4, initial state)

Amyloid-beta precursor protein experimental SAS data
DAMMIN model
Sample: Amyloid-beta precursor protein, 5 kDa Homo sapiens protein
Buffer: 1 mM Hepes, 0.1 % NH4OH (pH∼10.7), pH: 10.7
Experiment: SAXS data collected at EMBL P12, PETRA III on 2020 Oct 31
Time-resolved small-angle X-ray scattering study of polymorphic nature of Aß42 oligomerisation
Tia Cheremnykh
RgGuinier 2.5 nm
Dmax 6.5 nm

SASDPS7 – Amyloid Beta 1-42 (cluster 2, Set 4, final state)

Amyloid-beta precursor protein experimental SAS data
DAMMIN model
Sample: Amyloid-beta precursor protein, 5 kDa Homo sapiens protein
Buffer: 1 mM Hepes, 0.1 % NH4OH (pH∼10.7), pH: 10.7
Experiment: SAXS data collected at EMBL P12, PETRA III on 2020 Nov 1
Time-resolved small-angle X-ray scattering study of polymorphic nature of Aß42 oligomerisation
Tia Cheremnykh
RgGuinier 3.7 nm
Dmax 9.1 nm

SASDPT7 – Amyloid Beta 1-42 (cluster 2, Set 5, final state)

Amyloid-beta precursor protein experimental SAS data
DAMMIN model
Sample: Amyloid-beta precursor protein, 5 kDa Homo sapiens protein
Buffer: 1 mM Hepes, 0.1 % NH4OH (pH∼10.7), pH: 10.7
Experiment: SAXS data collected at EMBL P12, PETRA III on 2020 Nov 1
Time-resolved small-angle X-ray scattering study of polymorphic nature of Aß42 oligomerisation
Tia Cheremnykh
RgGuinier 3.7 nm
Dmax 11.0 nm

SASDPU7 – Amyloid Beta 1-42 (cluster 1, Set 1, initial state)

Amyloid-beta precursor protein experimental SAS data
DAMMIN model
Sample: Amyloid-beta precursor protein, 5 kDa Homo sapiens protein
Buffer: 1 mM Hepes, 0.12 % NH4OH, pH: 10.7
Experiment: SAXS data collected at EMBL P12, PETRA III on 2018 Nov 2
Time-resolved small-angle X-ray scattering study of polymorphic nature of Aß42 oligomerisation
Tia Cheremnykh
RgGuinier 3.5 nm
Dmax 15.0 nm

SASDSG5 – Human MUC2 mucin CysD2 domain

Mucin-2 (CysD2 domain) experimental SAS data
Mucin-2 (CysD2 domain) Kratky plot
Sample: Mucin-2 (CysD2 domain) monomer, 16 kDa Homo sapiens protein
Buffer: 20 mM sodium phosphate, 70 mM NaCl, pH: 7.2
Experiment: SAXS data collected at EMBL P12, PETRA III on 2023 Mar 8
The structure of the second CysD domain of MUC2 and role in mucin organization by transglutaminase-based cross-linking. Cell Rep 43(5):114207 (2024)
Recktenwald CV, Karlsson G, Garcia-Bonete MJ, Katona G, Jensen M, Lymer R, Bäckström M, Johansson MEV, Hansson GC, Trillo-Muyo S
RgGuinier 2.5 nm
Dmax 9.3 nm
VolumePorod 31 nm3