Small Angle Scattering Biological Data Bank SASBDB

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SASDBV4 – Vaccinia virus MVA F1L antiapoptotic Bcl-2 viral protein

MVA F1L antiapoptotic Bcl-2 viral protein experimental SAS data

Sample:	MVA F1L antiapoptotic Bcl-2 viral protein dimer, 51 kDa Vaccinia virus protein
Buffer:	25 mM HEPES 150 mM NaCl 5 mM DTT, pH: 7.5
Experiment:	SAXS data collected at SAXS/WAXS, Australian Synchrotron on 2016 Apr 15

The N Terminus of the Vaccinia Virus Protein F1L Is an Intrinsically Unstructured Region That Is Not Involved in Apoptosis Regulation. J Biol Chem 291(28):14600-8 (2016)
Caria S, Marshall B, Burton RL, Campbell S, Pantaki-Eimany D, Hawkins CJ, Barry M, Kvansakul M

R_g^Guinier	3.4	nm
D_max	16.2	nm
Volume^Porod	74	nm³

SASDB54 – Leishmania braziliensis stress-induced protein sti1 (LbHop), full length construct

Stress-induced protein sti1 experimental SAS data

Sample:	Stress-induced protein sti1 monomer, 62 kDa Leishmania braziliensis protein
Buffer:	25 mM Tris 100 mM NaCl 1 mM EDTA 1 mM β-mercaptoethanol, pH: 7.5
Experiment:	SAXS data collected at SAXS1 Beamline, Brazilian Synchrotron Light Laboratory on 2016 Feb 21

Low sequence identity but high structural and functional conservation: The case of Hsp70/Hsp90 organizing protein (Hop/Sti1) of Leishmania braziliensis. Arch Biochem Biophys 600:12-22 (2016)
Batista FAH, Seraphim TV, Santos CA, Gonzaga MR, Barbosa LRS, Ramos CHI, Borges JC

R_g^Guinier	4.5	nm
D_max	18.0	nm
Volume^Porod	94	nm³

SASDB64 – Leishmania braziliensis stress-induced protein sti1 (LbHop TPR2A-TPR2B-DP2 construct)

Stress-induced protein sti1 (Hop TPR2A-TPR2B-DP2 construct) experimental SAS data

Sample:	Stress-induced protein sti1 (Hop TPR2A-TPR2B-DP2 construct) monomer, 44 kDa Leishmania braziliensis protein
Buffer:	25 mM Tris 100 mM NaCl 1 mM EDTA 1 mM β-mercaptoethanol, pH: 7.5
Experiment:	SAXS data collected at SAXS2 Beamline, Brazilian Synchrotron Light Laboratory on 2016 Feb 21

R_g^Guinier	3.8	nm
D_max	14.0	nm
Volume^Porod	65	nm³

SASDAU8 – Immunosuppressive virulence protein YopM

Yersinia outer protein M (34-481) experimental SAS data

Sample:	Yersinia outer protein M (34-481) dimer, 101 kDa Yersinia enterocolitica protein
Buffer:	50 mM HEPES 150 mM NaCl, pH: 7.5
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2013 Nov 13

Immunosuppressive Yersinia Effector YopM Binds DEAD Box Helicase DDX3 to Control Ribosomal S6 Kinase in the Nucleus of Host Cells. PLoS Pathog 12(6):e1005660 (2016)
Berneking L, Schnapp M, Rumm A, Trasak C, Ruckdeschel K, Alawi M, Grundhoff A, Kikhney AG, Koch-Nolte F, Buck F, Perbandt M, Betzel C, Svergun DI, Hentschke M, Aepfelbacher M

R_g^Guinier	3.9	nm
D_max	11.5	nm
Volume^Porod	154	nm³

SASDAV8 – DEAD box helicase DDX3

DEAD box RNA helicase DDX3 (51-418) experimental SAS data

Sample:	DEAD box RNA helicase DDX3 (51-418) monomer, 42 kDa Yersinia enterocolitica protein
Buffer:	50 mM HEPES 150 mM NaCl, pH: 7.5
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2013 Nov 13

R_g^Guinier	2.8	nm
D_max	12.0	nm
Volume^Porod	80	nm³

SASDAW8 – 2:1 YopM:DDX3 complex

Yersinia outer protein M (34-481)DEAD box RNA helicase DDX3 (51-418) experimental SAS data

Sample:	Yersinia outer protein M (34-481) dimer, 101 kDa Yersinia enterocolitica protein DEAD box RNA helicase DDX3 (51-418) monomer, 42 kDa Yersinia enterocolitica protein
Buffer:	50 mM HEPES 150 mM NaCl, pH: 7.5
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2013 Jun 14

R_g^Guinier	4.0	nm
D_max	15.0	nm
Volume^Porod	190	nm³

SASDBU4 – Vaccinia primase D5 protein fragment containing the D5N and helicase domain

Primase D5 protein fragment containing the D5N and helicase domain experimental SAS data

Sample:	Primase D5 protein fragment containing the D5N and helicase domain hexamer, 321 kDa Vaccinia virus protein
Buffer:	20 mM Tris 150 mM NaCL 5% glycerol 1mM DTT, pH: 7
Experiment:	SAXS data collected at BM29, ESRF on 2014 Sep 26

Domain Organization of Vaccinia Virus Helicase-Primase D5. J Virol 90(9):4604-4613 (2016)
Hutin S, Ling WL, Round A, Effantin G, Reich S, Iseni F, Tarbouriech N, Schoehn G, Burmeister WP

R_g^Guinier	4.8	nm
D_max	14.5	nm
Volume^Porod	570	nm³

SASDB74 – CyaA Block I-V

Adenylate cyclase toxin Block I-V experimental SAS data

Sample:	Adenylate cyclase toxin Block I-V monomer, 70 kDa Bordetella pertussis protein
Buffer:	10 mM Tris HCl 150 mM NaCl 10 mM CaCl2, pH: 8
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2013 Oct 31

Calcium-Driven Folding of RTX Domain β-Rolls Ratchets Translocation of RTX Proteins through Type I Secretion Ducts. Mol Cell 62(1):47-62 (2016)
Bumba L, Masin J, Macek P, Wald T, Motlova L, Bibova I, Klimova N, Bednarova L, Veverka V, Kachala M, Svergun DI, Barinka C, Sebo P

R_g^Guinier	5.6	nm
D_max	17.2	nm
Volume^Porod	275	nm³

SASDB84 – CyaA Block V

Adenylate cyclase toxin Block V experimental SAS data

Sample:	Adenylate cyclase toxin Block V monomer, 16 kDa Bordetella pertussis protein
Buffer:	10 mM Tris HCl 150 mM NaCl 10 mM CaCl2, pH: 8
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2013 Oct 31

R_g^Guinier	1.8	nm
D_max	5.9	nm
Volume^Porod	24	nm³

SASDAX8 – Ribokinase ThiM

Sample:	Ribokinase ThiM trimer, 89 kDa Staphylococcus aureus protein
Buffer:	50 mM Potassium phosphate 10 mM MgCl2, pH: 7.5
Experiment:	SAXS data collected at EMBL X33, DORIS III, DESY on 2010 Nov 19

Structure of ThiM from Vitamin B1 biosynthetic pathway of Staphylococcus aureus - Insights into a novel pro-drug approach addressing MRSA infections. Sci Rep 6:22871 (2016)
Drebes J, Künz M, Windshügel B, Kikhney AG, Müller IB, Eberle RJ, Oberthür D, Cang H, Svergun DI, Perbandt M, Betzel C, Wrenger C

R_g^Guinier	3.0	nm
D_max	9.0	nm
Volume^Porod	145	nm³

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