Bacterial targeting of the neutrophil inhibitory receptor LILRB3 to evade antibody immunity

Ying Zhang.

SASDVA4 – β-Antigen C Protein B6C domain bound to Leukocyte Immunoglobulin-Like Receptor LILR-B3

IgA FC receptor
Leukocyte immunoglobulin-like receptor subfamily B member 3 (P288R)
MWexperimental 87 kDa
MWexpected 67 kDa
VPorod 202 nm3
log I(s) 9.00×101 9.00×100 9.00×10-1 9.00×10-2
IgA FC receptor Leukocyte immunoglobulin-like receptor subfamily B member 3 (P288R) small angle scattering data  s, nm-1
ln I(s)
IgA FC receptor Leukocyte immunoglobulin-like receptor subfamily B member 3 (P288R) Guinier plot ln 9.01×101 Rg: 3.9 nm 0 (3.9 nm)-2 s2
(sRg)2I(s)/I(0)
IgA FC receptor Leukocyte immunoglobulin-like receptor subfamily B member 3 (P288R) Kratky plot 1.104 0 3 sRg
p(r)
IgA FC receptor Leukocyte immunoglobulin-like receptor subfamily B member 3 (P288R) pair distance distribution function Rg: 4.0 nm 0 Dmax: 13.5 nm

Data validation


Fits and models


log I(s)
 s, nm-1
IgA FC receptor Leukocyte immunoglobulin-like receptor subfamily B member 3 (P288R) MULTIFOXS model

Size-exclusion chromatography coupled small-angle X-ray scattering (SEC-SAXS) data of B75KN-CTD bound to LILRB3 were obtained using the SIBYLS beamline 12.3.1 at the Advanced Light Source, Lawrence Berkeley National Laboratory. The experiments were conducted with a sample-to-detector distance of 2.1 m and a wavelength. λ, of 0.1127 nm, yielding scattering vectors (s) ranging from 0.1 nm⁻¹ to 4 nm⁻¹. The scattering vector, s, is calculated using the equation s = 4πsinθ/λ, where 2θ represents the scattering angle. Size-exclusion chromatography (SEC) was performed using an Agilent 1260 series HPLC with a Shodex analytical column. A 60 μl sample at a 5 mg/ml protein concentration was injected at a flow rate of 0.65 ml/min onto a Shodex KW-803 column at 4°C. A total of 906 successive 2-second frames were captured. Subsequently, data normalization was conducted against the intensity of the transmitted beam, followed by radial averaging, and subtraction of the scattering from a solvent blank.

IgA FC receptor (B6C)
Mol. type   Protein
Organism   Streptococcus agalactiae
Olig. state   Monomer
Mon. MW   19.8 kDa
 
UniProt   P27951 (258-428)
Sequence   FASTA
 
Leukocyte immunoglobulin-like receptor subfamily B member 3 (P288R) (LILRB3)
Mol. type   Protein
Organism   Homo sapiens
Olig. state   Monomer
Mon. MW   47.0 kDa
 
UniProt   A0A0G2JM46 (24-443)
Sequence   FASTA