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5 hits found for Bonete

SASDT82 – Halophilic Lrp transcription factor

AsnC family transcriptional regulator experimental SAS data
PHENIX model
Sample: AsnC family transcriptional regulator dimer, 36 kDa Haloferax mediterranei (strain … protein
Buffer: 50 mM Tris, 1.5 M NaCl, pH: 8
Experiment: SAXS data collected at BM29, ESRF on 2021 Nov 12
Global Lrp regulator protein from Haloferax mediterranei: Transcriptional analysis and structural characterization. Int J Biol Macromol :129541 (2024)
...Bonete MJ, Guío J, Camacho M, Fillat MF, Esclapez J, Bonete MJ
RgGuinier 2.4 nm
Dmax 7.9 nm
VolumePorod 70 nm3

SASDPL4 – Human MUC2 mucin C-terminal dimer

Human Mucin 2 C-terminal experimental SAS data
DAMMIN model
Sample: Human Mucin 2 C-terminal dimer, 240 kDa Homo sapiens protein
Buffer: 25 mM HEPES, 100 mM NaCl, 10 mM CaCl2, pH: 7.4
Experiment: SAXS data collected at BM29, ESRF on 2020 Nov 20
The intestinal MUC2 mucin C-terminus is stabilized by an extra disulfide bond in comparison to von Willebrand factor and other gel-forming mucins Nature Communications 14(1) (2023)
...Bonete M, Trillo-Muyo S, Recktenwald C, Johansson M, Hansson G
RgGuinier 8.4 nm
Dmax 32.0 nm
VolumePorod 684 nm3

SASDSG5 – Human MUC2 mucin CysD2 domain

Mucin-2 (CysD2 domain) experimental SAS data
Mucin-2 (CysD2 domain) Kratky plot
Sample: Mucin-2 (CysD2 domain) monomer, 16 kDa Homo sapiens protein
Buffer: 20 mM sodium phosphate, 70 mM NaCl, pH: 7.2
Experiment: SAXS data collected at EMBL P12, PETRA III on 2023 Mar 8
The structure of the second CysD domain of MUC2 and role in mucin organization by transglutaminase-based cross-linking. Cell Rep 43(5):114207 (2024)
...Bonete MJ, Katona G, Jensen M, Lymer R, Bäckström M, Johansson MEV, Hansson GC, Trillo-Muyo S
RgGuinier 2.5 nm
Dmax 9.3 nm
VolumePorod 31 nm3

SASDR86 – Human Survivin (BIRC5)

Baculoviral IAP repeat-containing protein 5 experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Baculoviral IAP repeat-containing protein 5 dimer, 34 kDa Homo sapiens protein
Buffer: 50 mM Tris, 150 mM NaCl, 1 mM DTT, pH: 8
Experiment: SAXS data collected at BM29, ESRF on 2023 Jan 10
Survivin prevents the Polycomb Repressor Complex 2 from methylating Histone 3 lysine 27 iScience :106976 (2023)
...Bonete M, Li S, Anindya A, Andersson K, Erlandsson M, Oparina N, Burmann B, Brath U, Panchenko A, Maria Bokarewa I, Katona G
RgGuinier 2.9 nm
Dmax 10.4 nm
VolumePorod 53 nm3

SASDTV8 – Mouse Fc fragment of IgG binding protein

Fc fragment of IgG binding protein experimental SAS data
DAMMIN model
Sample: Fc fragment of IgG binding protein dimer, 552 kDa Mus musculus protein
Buffer: 25 mM HEPES, 100 mM NaCl, 10 mM CaCl2, pH: 7.4
Experiment: SAXS data collected at BM29, ESRF on 2020 Nov 20
The structure of FCGBP is formed as a disulfide-mediated homodimer between its C-terminal domains. FEBS J (2025)
...Bonete MJ, Recktenwald CV, Hansson GC, Johansson MEV
RgGuinier 10.0 nm
Dmax 42.0 nm
VolumePorod 1462 nm3