Bacterial targeting of the neutrophil inhibitory receptor LILRB3 to evade antibody immunity

Ying Zhang.

SASDVB4 – β-Antigen C Protein B75KN-CTD domain bound to Leukocyte Immunoglobulin-Like Receptor LILR-B3

Leukocyte immunoglobulin-like receptor subfamily B member 3 (P288R)
IgA FC receptor (N770H)
MWexperimental 78 kDa
MWexpected 59 kDa
VPorod 175 nm3
log I(s) 7.22×101 7.22×100 7.22×10-1 7.22×10-2
Leukocyte immunoglobulin-like receptor subfamily B member 3 (P288R) IgA FC receptor (N770H) small angle scattering data  s, nm-1
ln I(s)
Leukocyte immunoglobulin-like receptor subfamily B member 3 (P288R) IgA FC receptor (N770H) Guinier plot ln 7.23×101 Rg: 3.9 nm 0 (3.9 nm)-2 s2
(sRg)2I(s)/I(0)
Leukocyte immunoglobulin-like receptor subfamily B member 3 (P288R) IgA FC receptor (N770H) Kratky plot 1.104 0 3 sRg
p(r)
Leukocyte immunoglobulin-like receptor subfamily B member 3 (P288R) IgA FC receptor (N770H) pair distance distribution function Rg: 3.9 nm 0 Dmax: 14.1 nm

Data validation


Fits and models


log I(s)
 s, nm-1
Leukocyte immunoglobulin-like receptor subfamily B member 3 (P288R) IgA FC receptor (N770H) MULTIFOXS model

Size-exclusion chromatography coupled small-angle X-ray scattering (SEC-SAXS) data of B75KN-CTD bound to LILRB3 were obtained using the SIBYLS beamline 12.3.1 at the Advanced Light Source, Lawrence Berkeley National Laboratory. The experiments were conducted with a sample-to-detector distance of 2.1 m and a wavelength, λ, of 0.1127 nm, yielding scattering vectors (s) ranging from 0.1 nm⁻¹ to 4 nm⁻¹. The scattering vector, s, is calculated using the equation s = 4πsinθ/λ, where 2θ represents the scattering angle. Size-exclusion chromatography (SEC) was performed using an Agilent 1260 series HPLC with a Shodex analytical column. A 60 μl sample at a 5 mg/ml protein concentration was injected at a flow rate of 0.65 ml/min onto a Shodex KW-803 column at 4°C. A total of 906 successive 2-second frames were captured. Subsequently, data normalization was conducted against the intensity of the transmitted beam, followed by radial averaging, and subtraction of the scattering from a solvent blank.

Leukocyte immunoglobulin-like receptor subfamily B member 3 (P288R) (LILRB3)
Mol. type   Protein
Organism   Homo sapiens
Olig. state   Monomer
Mon. MW   47.0 kDa
 
UniProt   A0A0G2JM46 (24-443)
Sequence   FASTA
 
IgA FC receptor (N770H) (B75KN-CTD)
Mol. type   Protein
Organism   Streptococcus agalactiae
Olig. state   Monomer
Mon. MW   11.5 kDa
 
UniProt   P27951 (725-826)
Sequence   FASTA