Bacterial targeting of the neutrophil inhibitory receptor LILRB3 to evade antibody immunity

Ying Zhang.

SASDXF8 – β-Antigen C Protein bound to Leukocyte Immunoglobulin-Like Receptor LILR-B3

IgA FC receptor β-Antigen C Protein
Leukocyte immunoglobulin-like receptor subfamily B3
MWexperimental 177 kDa
MWexpected 165 kDa
VPorod 447 nm3
log I(s) 6.65×101 6.65×100 6.65×10-1 6.65×10-2
IgA FC receptor β-Antigen C Protein Leukocyte immunoglobulin-like receptor subfamily B3 small angle scattering data  s, nm-1
ln I(s)
IgA FC receptor β-Antigen C Protein Leukocyte immunoglobulin-like receptor subfamily B3 Guinier plot ln 6.66×101 Rg: 7.0 nm 0 (7.0 nm)-2 s2
(sRg)2I(s)/I(0)
IgA FC receptor β-Antigen C Protein Leukocyte immunoglobulin-like receptor subfamily B3 Kratky plot 1.104 0 3 sRg
p(r)
IgA FC receptor β-Antigen C Protein Leukocyte immunoglobulin-like receptor subfamily B3 pair distance distribution function Rg: 7.8 nm 0 Dmax: 26.5 nm

Data validation


Fits and models


log I(s)
 s, nm-1
IgA FC receptor β-Antigen C Protein Leukocyte immunoglobulin-like receptor subfamily B3 FOXSDOCK model

Synchrotron small-angle X-ray scattering (SAXS) data for β-Antigen C protein in complex with two molecules of leukocyte immunoglobulin-like receptor LILR-B3 were collected at SIBYLS beamline 12.3.1 of the Advanced Light Source in SEC-SAXS mode. In-line size-exclusion chromatography (SEC) was performed using an Agilent 1260 HPLC system. The SEC conditions were as follows: a 60 µL sample at 5 mg/mL was injected onto a Shodex KW-803 column at 4 °C that had been previously equilibrated in 20 mM HEPES, 140 mM NaCl, pH 7.4, and eluted at 0.65 mL/min. Scattering was recorded on a Pilatus3 X 2M detector at a sample-to-detector distance of 2.1 m and a wavelength of λ = 0.1127 nm (I(q) vs q; q = 4π sin θ/λ, where 2θ is the scattering angle). 913 successive 2-s frames were collected. The scattering curves were normalized to the transmitted-beam intensity, radially averaged, and corrected by subtracting the solvent blank.

IgA FC receptor β-Antigen C Protein (β-Antigen C Protein)
Mol. type   Protein
Organism   Streptococcus agalactiae
Olig. state   Monomer
Mon. MW   70.9 kDa
 
UniProt   P27951 (258-826)
Sequence   FASTA
 
Leukocyte immunoglobulin-like receptor subfamily B3 (LILRB3)
Mol. type   Protein
Organism   Homo sapiens
Olig. state   Monomer
Mon. MW   47.0 kDa
 
UniProt   A0A0G2JM46 (24-443)
Sequence   FASTA