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13
hits found for
Xist A-repeat lncRNA
SASDPB5
– ...
Xist
A-repeat
s (Liu buffer)
Sample:
Xist
A-repeat
lncRNA
monomer, 148 kDa
Homo sapiens
RNA
Buffer:
25 mM K-HEPES, 0.1 mM Na-EDTA, 150 mM KCl, 15 mM MgCl2, pH: 7
Experiment:
SAXS data collected at EMBL P12, PETRA III
on 2020 Jun 20
...
lncRNA
Xist
A-repeat
s indicates a modular structure
Alisha Jones
R
g
Guinier
12.1
nm
D
max
45.0
nm
SASDPC5
– ...
Xist
A-repeat
s (Smola buffer)
Sample:
Xist
A-repeat
lncRNA
monomer, 148 kDa
Homo sapiens
RNA
Buffer:
100 mM HEPES, 100 mM NaCl, 10 mM MgCl2, pH: 8
Experiment:
SAXS data collected at EMBL P12, PETRA III
on 2020 Jun 20
...
lncRNA
Xist
A-repeat
s indicates a modular structure
Alisha Jones
R
g
Guinier
9.8
nm
D
max
40.0
nm
Volume
Porod
657
nm
3
SASDPD5
– ...
Xist
A-repeat
s (Maenner buffer)
Sample:
Xist
A-repeat
lncRNA
monomer, 148 kDa
Homo sapiens
RNA
Buffer:
20 mM HEPES-KOH, 100 mM KCl, 0.2 mM EDTA, 0.5 mM DTT, 0.5 mM PMSF, 20% glycerol, 3.25 mM MgCl2, pH: 7.9
Experiment:
SAXS data collected at EMBL P12, PETRA III
on 2020 Jun 20
...
lncRNA
Xist
A-repeat
s indicates a modular structure
Alisha Jones
R
g
Guinier
8.9
nm
D
max
35.0
nm
Volume
Porod
414
nm
3
SASDPE5
– ...
Xist
A-repeat
s (Duszczyk buffer)
Sample:
Xist
A-repeat
lncRNA
monomer, 148 kDa
Homo sapiens
RNA
Buffer:
10 mM NaH2PO4/Na2HPO4, 100 mM NaCl, 0.02 mM EDTA, 0.02% azide, pH: 6
Experiment:
SAXS data collected at EMBL P12, PETRA III
on 2020 Jun 20
...
lncRNA
Xist
A-repeat
s indicates a modular structure
Alisha Jones
R
g
Guinier
7.6
nm
D
max
30.0
nm
Volume
Porod
370
nm
3
SASDPF5
– ...
Xist
A-repeat
s (14mer)
Sample:
Xist
A-repeat
lncRNA
14 mer monomer, 5 kDa RNA
Buffer:
50 mM HEPES, 150 mM NaCl, 2 mM MgCl2, pH: 7
Experiment:
SAXS data collected at EMBL P12, PETRA III
on 2020 Jun 20
...
lncRNA
Xist
A-repeat
s indicates a modular structure
Alisha Jones
R
g
Guinier
2.1
nm
D
max
8.5
nm
Volume
Porod
13
nm
3
SASDPG5
– ...
Xist
A-repeat
s (26mer)
Sample:
Xist
A-repeat
lncRNA
24 mer dimer, 16 kDa RNA
Buffer:
50 mM HEPES, 150 mM NaCl, 2 mM MgCl2, pH: 7
Experiment:
SAXS data collected at EMBL P12, PETRA III
on 2020 Jun 20
...
lncRNA
Xist
A-repeat
s indicates a modular structure
Alisha Jones
R
g
Guinier
3.1
nm
D
max
14.5
nm
Volume
Porod
28
nm
3
SASDPH5
– ...
Xist
A-repeat
s (1 repeat)
Sample:
Xist
A-repeat
lncRNA
1 repeat dimer, 41 kDa RNA
Buffer:
50 mM HEPES, 150 mM NaCl, 2 mM MgCl2, pH: 7
Experiment:
SAXS data collected at EMBL P12, PETRA III
on 2020 Jun 20
...
lncRNA
Xist
A-repeat
s indicates a modular structure
Alisha Jones
R
g
Guinier
3.9
nm
D
max
16.0
nm
Volume
Porod
42
nm
3
SASDPJ5
– ...
Xist
A-repeat
s (2 repeats)
Sample:
Xist
A-repeat
lncRNA
2 repeats monomer, 34 kDa RNA
Buffer:
50 mM HEPES, 150 mM NaCl, 2 mM MgCl2, pH: 7
Experiment:
SAXS data collected at EMBL P12, PETRA III
on 2020 Jun 20
...
lncRNA
Xist
A-repeat
s indicates a modular structure
Alisha Jones
R
g
Guinier
5.0
nm
D
max
23.0
nm
Volume
Porod
87
nm
3
SASDPK5
– ...
Xist
A-repeat
s (3 repeats)
Sample:
Xist
A-repeat
lncRNA
3 repeats monomer, 48 kDa RNA
Buffer:
50 mM HEPES, 150 mM NaCl, 2 mM MgCl2, pH: 7
Experiment:
SAXS data collected at EMBL P12, PETRA III
on 2020 Jun 20
...
lncRNA
Xist
A-repeat
s indicates a modular structure
Alisha Jones
R
g
Guinier
6.3
nm
D
max
22.0
nm
Volume
Porod
97
nm
3
SASDPL5
– ...
Xist
A-repeat
s (4 repeats)
Sample:
Xist
A-repeat
lncRNA
4 repeats monomer, 62 kDa RNA
Buffer:
50 mM HEPES, 150 mM NaCl, 2 mM MgCl2, pH: 7
Experiment:
SAXS data collected at EMBL P12, PETRA III
on 2020 Jun 20
...
lncRNA
Xist
A-repeat
s indicates a modular structure
Alisha Jones
R
g
Guinier
7.2
nm
D
max
34.0
nm
SASDPM5
– ...
Xist
A-repeat
s (5 repeats)
Sample:
Xist
A-repeat
lncRNA
5 repeats monomer, 81 kDa RNA
Buffer:
50 mM HEPES, 150 mM NaCl, 2 mM MgCl2, pH: 7
Experiment:
SAXS data collected at EMBL P12, PETRA III
on 2020 Jun 20
...
lncRNA
Xist
A-repeat
s indicates a modular structure
Alisha Jones
R
g
Guinier
7.7
nm
D
max
30.0
nm
Volume
Porod
186
nm
3
SASDPN5
– ...
Xist
A-repeat
s (6 repeats)
Sample:
Xist
A-repeat
lncRNA
6 repeats monomer, 96 kDa RNA
Buffer:
50 mM HEPES, 150 mM NaCl, 2 mM MgCl2, pH: 7
Experiment:
SAXS data collected at EMBL P12, PETRA III
on 2020 Jun 20
...
lncRNA
Xist
A-repeat
s indicates a modular structure
Alisha Jones
R
g
Guinier
12.9
nm
D
max
38.0
nm
SASDPP5
– ...
Xist
A-repeat
s (8 repeats)
Sample:
Xist
A-repeat
lncRNA
monomer, 148 kDa
Homo sapiens
RNA
Buffer:
50 mM HEPES, 150 mM NaCl, 2 mM MgCl2, pH: 7
Experiment:
SAXS data collected at EMBL P12, PETRA III
on 2020 Jun 20
...
lncRNA
Xist
A-repeat
s indicates a modular structure
Alisha Jones
R
g
Guinier
11.2
nm
D
max
50.0
nm