Small Angle Scattering Biological Data Bank SASBDB

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13 hits found for Xist A-repeat lncRNA

SASDPB5 – ...Xist A-repeats (Liu buffer)

Xist A-repeat lncRNA experimental SAS data

Xist A-repeat lncRNA Kratky plot

Sample:	Xist A-repeat lncRNA monomer, 148 kDa Homo sapiens RNA
Buffer:	25 mM K-HEPES, 0.1 mM Na-EDTA, 150 mM KCl, 15 mM MgCl2, pH: 7
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Jun 20

...lncRNA Xist A-repeats indicates a modular structure
Alisha Jones

R_g^Guinier	12.1	nm
D_max	45.0	nm

SASDPC5 – ...Xist A-repeats (Smola buffer)

Xist A-repeat lncRNA experimental SAS data

Xist A-repeat lncRNA Kratky plot

Sample:	Xist A-repeat lncRNA monomer, 148 kDa Homo sapiens RNA
Buffer:	100 mM HEPES, 100 mM NaCl, 10 mM MgCl2, pH: 8
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Jun 20

...lncRNA Xist A-repeats indicates a modular structure
Alisha Jones

R_g^Guinier	9.8	nm
D_max	40.0	nm
Volume^Porod	657	nm³

SASDPD5 – ...Xist A-repeats (Maenner buffer)

Xist A-repeat lncRNA experimental SAS data

Xist A-repeat lncRNA Kratky plot

Sample:	Xist A-repeat lncRNA monomer, 148 kDa Homo sapiens RNA
Buffer:	20 mM HEPES-KOH, 100 mM KCl, 0.2 mM EDTA, 0.5 mM DTT, 0.5 mM PMSF, 20% glycerol, 3.25 mM MgCl2, pH: 7.9
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Jun 20

...lncRNA Xist A-repeats indicates a modular structure
Alisha Jones

R_g^Guinier	8.9	nm
D_max	35.0	nm
Volume^Porod	414	nm³

SASDPE5 – ...Xist A-repeats (Duszczyk buffer)

Xist A-repeat lncRNA experimental SAS data

Xist A-repeat lncRNA Kratky plot

Sample:	Xist A-repeat lncRNA monomer, 148 kDa Homo sapiens RNA
Buffer:	10 mM NaH2PO4/Na2HPO4, 100 mM NaCl, 0.02 mM EDTA, 0.02% azide, pH: 6
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Jun 20

...lncRNA Xist A-repeats indicates a modular structure
Alisha Jones

R_g^Guinier	7.6	nm
D_max	30.0	nm
Volume^Porod	370	nm³

SASDPF5 – ...Xist A-repeats (14mer)

Xist A-repeat lncRNA 14 mer experimental SAS data

Xist A-repeat lncRNA 14 mer Kratky plot

Sample:	Xist A-repeat lncRNA 14 mer monomer, 5 kDa RNA
Buffer:	50 mM HEPES, 150 mM NaCl, 2 mM MgCl2, pH: 7
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Jun 20

...lncRNA Xist A-repeats indicates a modular structure
Alisha Jones

R_g^Guinier	2.1	nm
D_max	8.5	nm
Volume^Porod	13	nm³

SASDPG5 – ...Xist A-repeats (26mer)

Xist A-repeat lncRNA 24 mer experimental SAS data

Xist A-repeat lncRNA 24 mer Kratky plot

Sample:	Xist A-repeat lncRNA 24 mer dimer, 16 kDa RNA
Buffer:	50 mM HEPES, 150 mM NaCl, 2 mM MgCl2, pH: 7
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Jun 20

...lncRNA Xist A-repeats indicates a modular structure
Alisha Jones

R_g^Guinier	3.1	nm
D_max	14.5	nm
Volume^Porod	28	nm³

SASDPH5 – ...Xist A-repeats (1 repeat)

Xist A-repeat lncRNA 1 repeat experimental SAS data

Xist A-repeat lncRNA 1 repeat Kratky plot

Sample:	Xist A-repeat lncRNA 1 repeat dimer, 41 kDa RNA
Buffer:	50 mM HEPES, 150 mM NaCl, 2 mM MgCl2, pH: 7
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Jun 20

...lncRNA Xist A-repeats indicates a modular structure
Alisha Jones

R_g^Guinier	3.9	nm
D_max	16.0	nm
Volume^Porod	42	nm³

SASDPJ5 – ...Xist A-repeats (2 repeats)

Xist A-repeat lncRNA 2 repeats experimental SAS data

Xist A-repeat lncRNA 2 repeats Kratky plot

Sample:	Xist A-repeat lncRNA 2 repeats monomer, 34 kDa RNA
Buffer:	50 mM HEPES, 150 mM NaCl, 2 mM MgCl2, pH: 7
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Jun 20

...lncRNA Xist A-repeats indicates a modular structure
Alisha Jones

R_g^Guinier	5.0	nm
D_max	23.0	nm
Volume^Porod	87	nm³

SASDPK5 – ...Xist A-repeats (3 repeats)

Xist A-repeat lncRNA 3 repeats experimental SAS data

Xist A-repeat lncRNA 3 repeats Kratky plot

Sample:	Xist A-repeat lncRNA 3 repeats monomer, 48 kDa RNA
Buffer:	50 mM HEPES, 150 mM NaCl, 2 mM MgCl2, pH: 7
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Jun 20

...lncRNA Xist A-repeats indicates a modular structure
Alisha Jones

R_g^Guinier	6.3	nm
D_max	22.0	nm
Volume^Porod	97	nm³

SASDPL5 – ...Xist A-repeats (4 repeats)

Xist A-repeat lncRNA 4 repeats experimental SAS data

Xist A-repeat lncRNA 4 repeats Kratky plot

Sample:	Xist A-repeat lncRNA 4 repeats monomer, 62 kDa RNA
Buffer:	50 mM HEPES, 150 mM NaCl, 2 mM MgCl2, pH: 7
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Jun 20

...lncRNA Xist A-repeats indicates a modular structure
Alisha Jones

R_g^Guinier	7.2	nm
D_max	34.0	nm

SASDPM5 – ...Xist A-repeats (5 repeats)

Xist A-repeat lncRNA 5 repeats experimental SAS data

Xist A-repeat lncRNA 5 repeats Kratky plot

Sample:	Xist A-repeat lncRNA 5 repeats monomer, 81 kDa RNA
Buffer:	50 mM HEPES, 150 mM NaCl, 2 mM MgCl2, pH: 7
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Jun 20

...lncRNA Xist A-repeats indicates a modular structure
Alisha Jones

R_g^Guinier	7.7	nm
D_max	30.0	nm
Volume^Porod	186	nm³

SASDPN5 – ...Xist A-repeats (6 repeats)

Xist A-repeat lncRNA 6 repeats experimental SAS data

Xist A-repeat lncRNA 6 repeats Kratky plot

Sample:	Xist A-repeat lncRNA 6 repeats monomer, 96 kDa RNA
Buffer:	50 mM HEPES, 150 mM NaCl, 2 mM MgCl2, pH: 7
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Jun 20

...lncRNA Xist A-repeats indicates a modular structure
Alisha Jones

R_g^Guinier	12.9	nm
D_max	38.0	nm

SASDPP5 – ...Xist A-repeats (8 repeats)

Xist A-repeat lncRNA experimental SAS data

Xist A-repeat lncRNA Kratky plot

Sample:	Xist A-repeat lncRNA monomer, 148 kDa Homo sapiens RNA
Buffer:	50 mM HEPES, 150 mM NaCl, 2 mM MgCl2, pH: 7
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Jun 20

...lncRNA Xist A-repeats indicates a modular structure
Alisha Jones

R_g^Guinier	11.2	nm
D_max	50.0	nm