Small Angle Scattering Biological Data Bank SASBDB

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SASDMY5 – Truncated Zea mays beta-amylase (ZmBAM7) short

Sample:	Beta-amylase tetramer, 231 kDa Zea mays protein
Buffer:	50 mM HEPES, 25 mM NaCl, and 0.2 mM TCEP, pH: 7.5
Experiment:	SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2020 Dec 7

The BAM7 gene in Zea mays encodes a protein with similar structural and catalytic properties to Arabidopsis BAM2 Acta Crystallographica Section D Structural Biology 78(5) (2022)
Ravenburg C, Riney M, Monroe J, Berndsen C

R_g^Guinier	5.1	nm
D_max	13.9	nm
Volume^Porod	467	nm³

SASDM26 – Sweet potato beta-amylase 5

Sample:	Beta-amylase tetramer, 224 kDa Ipomoea batatas protein
Buffer:	20 mM HEPES, 150 mM NaCl, and 0.2 mM TCEP, pH: 7.3
Experiment:	SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2020 Dec 7

R_g^Guinier	4.4	nm
D_max	14.1	nm
Volume^Porod	296	nm³

SASDKK3 – SEC-SAXS of Presequence Protease (PreP)

Presequence protease, mitochondrial experimental SAS data

Presequence protease, mitochondrial Kratky plot

Sample:	Presequence protease, mitochondrial monomer, 115 kDa Homo sapiens protein
Buffer:	20 mM Tris, 100 mM NaCl, pH: 7.7
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2020 Mar 4

Structural basis for the mechanisms of human presequence protease conformational switch and substrate recognition Nature Communications 13(1) (2022)
Liang W, Wijaya J, Wei H, Noble A, Mancl J, Mo S, Lee D, Lin King J, Pan M, Liu C, Koehler C, Zhao M, Potter C, Carragher B, Li S, Tang W

R_g^Guinier	3.2	nm
D_max	9.1	nm
Volume^Porod	170	nm³

SASDKL3 – SEC-SAXS of Presequence Protease (PreP) with inhibitor MitoBloCK-60 (MB-60)

Sample:	Presequence protease, mitochondrial monomer, 115 kDa Homo sapiens protein
Buffer:	20 mM Tris, 100 mM NaCl, pH: 7.7
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2020 Mar 7

R_g^Guinier	3.1	nm
D_max	9.1	nm
Volume^Porod	165	nm³

SASDKM3 – SEC-SAXS of Presequence Protease (PreP) with pre-sequence of citrate synthase (1-27)

Presequence protease, mitochondrialCitrate synthase, mitochondrial experimental SAS data

Presequence protease, mitochondrial Citrate synthase, mitochondrial Kratky plot

Sample:	Presequence protease, mitochondrial monomer, 115 kDa Homo sapiens protein Citrate synthase, mitochondrial monomer, 3 kDa Homo sapiens protein
Buffer:	20 mM Tris, 100 mM NaCl , 20 mM EDTA, pH: 7.7
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2020 Nov 4

R_g^Guinier	3.1	nm
D_max	8.7	nm
Volume^Porod	165	nm³

SASDKN3 – SEC-SAXS of Presequence Protease (PreP) with Amyloid beta precursor protein (1-40)

Presequence protease, mitochondrialAmyloid-beta precursor protein experimental SAS data

Presequence protease, mitochondrial Amyloid-beta precursor protein Kratky plot

Sample:	Presequence protease, mitochondrial monomer, 115 kDa Homo sapiens protein Amyloid-beta precursor protein monomer, 4 kDa Homo sapiens protein
Buffer:	20 mM Tris, 100 mM NaCl , 20 mM EDTA, pH: 7.7
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2020 Mar 7

R_g^Guinier	3.0	nm
D_max	8.5	nm
Volume^Porod	175	nm³

SASDN22 – Dockerin domain-containing protein, starch adherence system 20 (Sas20), domain 1 with maltoheptaose

Dockerin domain-containing protein experimental SAS data

Dockerin domain-containing protein Kratky plot

Sample:	Dockerin domain-containing protein monomer, 26 kDa Ruminococcus bromii protein
Buffer:	phosphate buffered saline, 1 mM TCEP, pH: 7
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2021 Nov 14

Sas20 is a highly flexible starch-binding protein in the Ruminococcus bromii cell-surface amylosome Journal of Biological Chemistry :101896 (2022)
Cerqueira F, Photenhauer A, Doden H, Brown A, Abdel-Hamid A, Moraïs S, Bayer E, Wawrzak Z, Cann I, Ridlon J, Hopkins J, Koropatkin N

R_g^Guinier	2.0	nm
D_max	7.8	nm
Volume^Porod	45	nm³

SASDN42 – Dockerin domain-containing protein, starch adherence system 20 (Sas20), domains 1 and 2 with maltoheptaose

Sample:	Dockerin domain-containing protein monomer, 26 kDa Ruminococcus bromii protein
Buffer:	phosphate buffered saline, 1 mM TCEP, pH: 7
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2021 Nov 14

R_g^Guinier	5.2	nm
D_max	19.0	nm
Volume^Porod	84	nm³

SASDNW5 – apo Roquin-1 (coreROQ) at 50 µM, including concentration series data at 100, 200, 300 µM

Sample:	Roquin-1 monomer, 18 kDa Mus musculus protein
Buffer:	150 mM NaCl, 20 mM Tris, 2 mM TCEP, pH: 7
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Jun 1

NMR-derived secondary structure of the full-length Ox40 mRNA 3'UTR and its multivalent binding to the immunoregulatory RBP Roquin. Nucleic Acids Res (2022)
Tants JN, Becker LM, McNicoll F, Müller-McNicoll M, Schlundt A

R_g^Guinier	1.9	nm
D_max	7.0	nm
Volume^Porod	35	nm³

SASDNX5 – apo Roquin-1 (extROQ) at 50 µM, including concentration series data at 100, 200, 300 µM

Sample:	Roquin-1 extROQ monomer, 35 kDa Mus musculus protein
Buffer:	150 mM NaCl, 20 mM Tris, 2 mM TCEP, pH: 7
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Jun 1

R_g^Guinier	2.8	nm
D_max	14.0	nm
Volume^Porod	53	nm³

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