Browse by MODEL: No model

SASDKG5 – 25 Based-Paired DNA Duplex

25 base-paired DNA Duplex experimental SAS data
25 base-paired DNA Duplex Kratky plot
Sample: 25 base-paired DNA Duplex monomer, 15 kDa DNA
Buffer: 100 mM NaCl, 10 mM sodium 3-(N-morpholino)propanesulfonic acid (Na-MOPS) and 20 uM EDTA, pH: 7
Experiment: SAXS data collected at 16-ID (LiX), National Synchrotron Light Source II (NSLS-II) on 2019 Jun 7
Wide-Angle X-ray Scattering (WAXS) Analysis of Small Nucleic Acids
Yen-Lin Chen
RgGuinier 2.3 nm
Dmax 8.4 nm

SASDKH5 – RNA Short Tetraloop Hairpin Duplex

RNA Short Tetraloop Hairpin Duplex experimental SAS data
RNA Short Tetraloop Hairpin Duplex Kratky plot
Sample: RNA Short Tetraloop Hairpin Duplex monomer, 13 kDa RNA
Buffer: 200mM NaCl, 1.0mM MgCl2, 20mM Na-MES, 50µM EDTA, pH: 5.5
Experiment: SAXS data collected at 16-ID (LiX), National Synchrotron Light Source II (NSLS-II) on 2019 Jun 7
Wide-Angle X-ray Scattering (WAXS) Analysis of Small Nucleic Acids
Yen-Lin Chen
RgGuinier 2.0 nm
Dmax 8.9 nm

SASDKJ5 – 25 Based-Paired DNA Duplex

25 base-paired DNA Duplex experimental SAS data
25 base-paired DNA Duplex Kratky plot
Sample: 25 base-paired DNA Duplex monomer, 15 kDa DNA
Buffer: 100 mM NaCl, 10 mM sodium 3-(N-morpholino)propanesulfonic acid (Na-MOPS) and 20 uM EDTA, pH: 7
Experiment: SAXS data collected at 16-ID (LiX), National Synchrotron Light Source II (NSLS-II) on 2019 Jun 7
Wide-Angle X-ray Scattering (WAXS) Analysis of Small Nucleic Acids
Yen-Lin Chen
RgGuinier 2.3 nm
Dmax 8.4 nm

SASDKK5 – RNA Short Tetraloop Hairpin Duplex

RNA Short Tetraloop Hairpin Duplex experimental SAS data
RNA Short Tetraloop Hairpin Duplex Kratky plot
Sample: RNA Short Tetraloop Hairpin Duplex monomer, 13 kDa RNA
Buffer: 200mM NaCl, 1.0mM MgCl2, 20mM Na-MES, 50µM EDTA, pH: 5.5
Experiment: SAXS data collected at 16-ID (LiX), National Synchrotron Light Source II (NSLS-II) on 2019 Jun 7
Wide-Angle X-ray Scattering (WAXS) Analysis of Small Nucleic Acids
Yen-Lin Chen
RgGuinier 2.0 nm
Dmax 8.9 nm

SASDKL5 – RNA Short Tetraloop Hairpin Triplex

RNA Short Tetraloop Hairpin Triplex experimental SAS data
RNA Short Tetraloop Hairpin Triplex Kratky plot
Sample: RNA Short Tetraloop Hairpin Triplex monomer, 17 kDa RNA
Buffer: 200mM NaCl, 1.0mM MgCl2, 20mM Na-MES, 50µM EDTA, pH: 5.5
Experiment: SAXS data collected at 16-ID (LiX), National Synchrotron Light Source II (NSLS-II) on 2019 Sep 20
Wide-Angle X-ray Scattering (WAXS) Analysis of Small Nucleic Acids
Yen-Lin Chen
RgGuinier 2.0 nm
Dmax 6.3 nm

SASDKM5 – Metastasis-Associated Lung Adenocarcinoma Transcript 1

Metastasis-Associated Lung Adenocarcinoma Transcript 1 experimental SAS data
Metastasis-Associated Lung Adenocarcinoma Transcript 1 Kratky plot
Sample: Metastasis-Associated Lung Adenocarcinoma Transcript 1 monomer, 23 kDa Homo sapiens RNA
Buffer: 50 mM KCl, 1.0 mM MgCl2, 10 mM MOPS, 25 μM EDTA, pH: 7
Experiment: SAXS data collected at 16-ID (LiX), National Synchrotron Light Source II (NSLS-II) on 2019 Jun 7
Wide-Angle X-ray Scattering (WAXS) Analysis of Small Nucleic Acids
Yen-Lin Chen
RgGuinier 2.3 nm
Dmax 7.9 nm

SASDKN5 – 30nt Single-stranded RNA

30nt Single-stranded RNA experimental SAS data
30nt Single-stranded RNA Kratky plot
Sample: 30nt Single-stranded RNA monomer, 10 kDa RNA
Buffer: 100 mM NaCl, 10 mM sodium 3-(N-morpholino)propanesulfonic acid (Na-MOPS) and 20 uM EDTA, pH: 7
Experiment: SAXS data collected at 16-ID (LiX), National Synchrotron Light Source II (NSLS-II) on 2019 Sep 20
Wide-Angle X-ray Scattering (WAXS) Analysis of Small Nucleic Acids
Yen-Lin Chen
RgGuinier 2.2 nm
Dmax 8.2 nm

SASDN57 – beta-hexosyl transferase (23-594), 1 mg/mL

Beta-galactosidase-like enzyme experimental SAS data
Beta-galactosidase-like enzyme Kratky plot
Sample: Beta-galactosidase-like enzyme dimer, 129 kDa Hamamotoa singularis protein
Buffer: 5 mM sodium phosphate, pH: 5
Experiment: SAXS data collected at Rigaku BioSAXS-2000, Oak Ridge National Laboratory on 2018 Jun 25
Structural analysis and functional evaluation of the disordered ß–hexosyltransferase region from Hamamotoa (Sporobolomyces) singularis Frontiers in Bioengineering and Biotechnology 11 (2023)
Dagher S, Vaishnav A, Stanley C, Meilleur F, Edwards B, Bruno-Bárcena J
RgGuinier 3.9 nm
Dmax 12.4 nm
VolumePorod 238 nm3

SASDN67 – beta-hexosyl transferase (23-594), 4 mg/mL

Beta-galactosidase-like enzyme experimental SAS data
Beta-galactosidase-like enzyme Kratky plot
Sample: Beta-galactosidase-like enzyme dimer, 129 kDa Hamamotoa singularis protein
Buffer: 5 mM sodium phosphate, pH: 5
Experiment: SAXS data collected at Rigaku BioSAXS-2000, Oak Ridge National Laboratory on 2018 Jun 25
Structural analysis and functional evaluation of the disordered ß–hexosyltransferase region from Hamamotoa (Sporobolomyces) singularis Frontiers in Bioengineering and Biotechnology 11 (2023)
Dagher S, Vaishnav A, Stanley C, Meilleur F, Edwards B, Bruno-Bárcena J
RgGuinier 3.7 nm
Dmax 12.5 nm
VolumePorod 236 nm3

SASDQV9 – Nanobody1 in complex with the extracellular domain of human BCMA

Tumor necrosis factor receptor superfamily member 17Nanobody1 experimental SAS data
Tumor necrosis factor receptor superfamily member 17 Nanobody1 Kratky plot
Sample: Tumor necrosis factor receptor superfamily member 17 monomer, 6 kDa Homo sapiens protein
Nanobody1 monomer, 14 kDa protein
Buffer: 20 mM Tris, 100 mM NaCl, pH: 8
Experiment: SAXS data collected at BL19U2, Shanghai Synchrotron Radiation Facility (SSRF) on 2022 Aug 28
Antigen-induced chimeric antigen receptor multimerization amplifies on-tumor cytotoxicity. Signal Transduct Target Ther 8(1):445 (2023)
Sun Y, Yang XN, Yang SS, Lyu YZ, Zhang B, Liu KW, Li N, Cui JC, Huang GX, Liu CL, Xu J, Mi JQ, Chen Z, Fan XH, Chen SJ, Chen S
RgGuinier 3.0 nm
Dmax 9.8 nm
VolumePorod 52 nm3