Small Angle Scattering Biological Data Bank SASBDB

Browse by MACROMOLECULE type: nucleic acid

SASDQD4 – Lipid_unpublished_76

Sample:	Lipid None, lipid
Buffer:	, pH:
Experiment:	SAXS data collected at EMBL X33, DORIS III, DESY on 2011 Dec 19

Lipid_unpublished_76
Siawosch Schewa

SASDQE4 – Lipid_unpublished_77

Sample:	Lipid None, lipid
Buffer:	, pH:
Experiment:	SAXS data collected at EMBL X33, DORIS III, DESY on 2011 Dec 19

Lipid_unpublished_77
Siawosch Schewa

SASDMV3 – Sigma-Aldrich polystyrene nanospheres with a diameter of 100 nm

Nominal 100 nm diameter polystyrene spheres experimental SAS data

Sample:	Nominal 100 nm diameter polystyrene spheres monomer, 315312 kDa
Buffer:	Water, pH: 7
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2022 May 16

Standard polystyrene nanospheres (concentration series data)
Dima Molodenskiy

R_g^Guinier	33.0	nm
D_max	100.0	nm
Volume^Porod	520	nm³

SASDMW3 – Thermo Fisher polystyrene nanospheres with a diameter of 20 nm

Nominal 20 nm diameter polystyrene spheres experimental SAS data

Sample:	Nominal 20 nm diameter polystyrene spheres 0, 8 kDa
Buffer:	Water, pH: 7
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2022 May 16

Standard polystyrene nanospheres (concentration series data)
Dima Molodenskiy

R_g^Guinier	8.5	nm
D_max	25.0	nm
Volume^Porod	3	nm³

SASDNJ7 – Non-pre-microRNA stem loop 2 (NPSL2)

Non-pre-microRNA stem loop 2 experimental SAS data

Sample:	Non-pre-microRNA stem loop 2 monomer, 14 kDa Homo sapiens RNA
Buffer:	50 mM potassium phosphate buffer, 1 mM MgCl2, 50 mM NaCl, pH: 7.5
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2022 Feb 20

Solution structure of NPSL2, a regulatory element in the oncomiR-1 RNA. J Mol Biol :167688 (2022)
Liu Y, Munsayac A, Hall I, Keane SC

R_g^Guinier	2.0	nm
D_max	7.7	nm
Volume^Porod	15	nm³

SASDNL2 – LincRNA-p21 Sense Alu Inverted Repeat

LincRNA-p21 AluSx1 Sense RNA experimental SAS data

Sample:	LincRNA-p21 AluSx1 Sense RNA monomer, 100 kDa Homo sapiens RNA
Buffer:	50mM HEPES,150 mM NaCl, 15 mM MgCl2, 3% glycerol, pH: 7.4
Experiment:	SAXS data collected at B21, Diamond Light Source on 2021 Jul 1

Biophysical characterisation of human LincRNA-p21 sense and antisense Alu inverted repeats. Nucleic Acids Res 50(10):5881-5898 (2022)
D'Souza MH, Mrozowich T, Badmalia MD, Geeraert M, Frederickson A, Henrickson A, Demeler B, Wolfinger MT, Patel TR

R_g^Guinier	6.1	nm
D_max	18.5	nm
Volume^Porod	225	nm³

SASDNM2 – LincRNA-p21 Antisense Alu Inverted Repeat

LincRNA-p21 AluSx1 Antisense RNA experimental SAS data

Sample:	LincRNA-p21 AluSx1 Antisense RNA monomer, 90 kDa Homo sapiens RNA
Buffer:	50mM HEPES,150 mM NaCl, 15 mM MgCl2, 3% glycerol, pH: 7.4
Experiment:	SAXS data collected at B21, Diamond Light Source on 2021 Jul 1

R_g^Guinier	5.9	nm
D_max	18.1	nm
Volume^Porod	375	nm³

SASDPG2 – Spiegelmer NOX-E36, 1.15 mg/ml

Spiegelmer NOX-E36 experimental SAS data

Sample:	Spiegelmer NOX-E36 monomer, 13 kDa synthetic construct RNA
Buffer:	20 mM HEPES, pH: 7.5
Experiment:	SAXS data collected at EMBL X33, DORIS III, DESY on 2009 Feb 20

Spiegelmers® NOX-E36 and NOX-A12
Al Kikhney, Bara Schmidt

R_g^Guinier	2.1	nm
D_max	8.0	nm
Volume^Porod	18	nm³

SASDPH2 – Spiegelmer NOX-E36, 4.46 mg/ml

Sample:	Spiegelmer NOX-E36 monomer, 13 kDa synthetic construct RNA
Buffer:	20 mM HEPES, pH: 7.5
Experiment:	SAXS data collected at EMBL X33, DORIS III, DESY on 2009 Feb 20

Spiegelmers® NOX-E36 and NOX-A12
Al Kikhney, Bara Schmidt

R_g^Guinier

2.1

SASDPJ2 – Spiegelmer NOX-A12, 1.0 mg/ml

Spiegelmer NOX-A12 experimental SAS data

Sample:	Spiegelmer NOX-A12 monomer, 15 kDa synthetic construct RNA
Buffer:	20 mM HEPES, pH: 7.5
Experiment:	SAXS data collected at EMBL X33, DORIS III, DESY on 2009 Feb 20

Spiegelmers® NOX-E36 and NOX-A12
Al Kikhney, Bara Schmidt

R_g^Guinier	2.1	nm
D_max	7.8	nm
Volume^Porod	21	nm³

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