Browse by MACROMOLECULE type: other and no molecule

SASDH46 – High Five insect cell culture infected with mock recombinant baculovirus (rBV)

mock recombinant baculovirus experimental SAS data
mock recombinant baculovirus Kratky plot
Sample: Mock recombinant baculovirus, 0 kDa unidentified baculovirus
Buffer: TBS (20 mM Tris, 150 mM NaCl),, pH: 7
Experiment: SAXS data collected at EMBL P12, PETRA III on 2019 Dec 3
Rapid screening of in cellulo grown protein crystals via a small-angle X-ray scattering/X-ray powder diffraction synergistic approach Journal of Applied Crystallography 53(5) (2020)
Lahey-Rudolph J, Schönherr R, Jeffries C, Blanchet C, Boger J, Ferreira Ramos A, Riekehr W, Triandafillidis D, Valmas A, Margiolaki I, Svergun D, Redecke L

SASDH56 – High Five insect cell culture (control; uninfected)

High Five insect cells experimental SAS data
High Five insect cells Kratky plot
Sample: High Five insect cells, 0 kDa Trichoplusia ni
Buffer: TBS (20 mM Tris, 150 mM NaCl),, pH: 7
Experiment: SAXS data collected at EMBL P12, PETRA III on 2019 Dec 3
Rapid screening of in cellulo grown protein crystals via a small-angle X-ray scattering/X-ray powder diffraction synergistic approach Journal of Applied Crystallography 53(5) (2020)
Lahey-Rudolph J, Schönherr R, Jeffries C, Blanchet C, Boger J, Ferreira Ramos A, Riekehr W, Triandafillidis D, Valmas A, Margiolaki I, Svergun D, Redecke L

SASDMK4 – Fe3O4 nanoparticles (radius 5.6 nm )

Fe3O4 nanoparticles; radius 5.6 nm (AFM based) experimental SAS data
Fe3O4 nanoparticles; radius 5.6 nm (AFM based) Kratky plot
Sample: Fe3O4 nanoparticles; radius 5.6 nm (AFM based) monomer, 1 kDa
Buffer: water, HCLO4, pH: 7
Experiment: SAXS data collected at EMBL P12, PETRA III on 2016 Sep 5
Effect of the concentration of protein and nanoparticles on the structure of biohybrid nanocomposites. Biopolymers 111(2):e23342 (2020)
Majorošová J, Schroer MA, Tomašovičová N, Batková M, Hu PS, Kubovčíková M, Svergun DI, Kopčanský P
RgGuinier 11.0 nm
Dmax 20.0 nm

SASDDQ5 – Human metaphase chromosomes in 17mM magnesium chloride

Metaphase chromosomes in 17 mM magnesium chloride experimental SAS data
Metaphase chromosomes in 17 mM magnesium chloride Kratky plot
Sample: Metaphase chromosomes in 17 mM magnesium chloride monomer, 0 kDa Homo sapiens
Buffer: 10 mM PIPES, 17 mM magnesium chloride, 20 mM sodium chloride, 120 mM potassium chloride, 40% glycerol, pH: 7.2
Experiment: SAXS data collected at BL11 - NCD, ALBA on 2013 May 23
Frozen-hydrated chromatin from metaphase chromosomes has an interdigitated multilayer structure. EMBO J 38(7) (2019)
Chicano A, Crosas E, Otón J, Melero R, Engel BD, Daban JR

SASDDR5 – Human metaphase chromosomes in 5 mM magnesium chloride

Human metaphase chromosomes in 5 mM magnesium chloride experimental SAS data
Human metaphase chromosomes in 5 mM magnesium chloride Kratky plot
Sample: Human metaphase chromosomes in 5 mM magnesium chloride monomer, 0 kDa Homo sapiens
Buffer: 10 mM PIPES, 5 mM magnesium chloride, 10 mM sodium chloride, 120 mM potassium chloride, 40% glycerol, pH: 7.2
Experiment: SAXS data collected at BL11 - NCD, ALBA on 2013 Jun 6
Frozen-hydrated chromatin from metaphase chromosomes has an interdigitated multilayer structure. EMBO J 38(7) (2019)
Chicano A, Crosas E, Otón J, Melero R, Engel BD, Daban JR

SASDDS5 – Human metaphase chromosomes in 1 mM hexaamminecobalt(III) chloride

Human metaphase chromosomes in 1 mM hexaamminecobalt(III) chloride experimental SAS data
Human metaphase chromosomes in 1 mM hexaamminecobalt(III) chloride Kratky plot
Sample: Human metaphase chromosomes in 1 mM hexaamminecobalt(III) chloride monomer, 0 kDa Homo sapiens
Buffer: 10 mM PIPES, hexaamminecobalt(III) chloride, 40% glycerol, pH: 7.2
Experiment: SAXS data collected at BL11 - NCD, ALBA on 2013 Sep 12
Frozen-hydrated chromatin from metaphase chromosomes has an interdigitated multilayer structure. EMBO J 38(7) (2019)
Chicano A, Crosas E, Otón J, Melero R, Engel BD, Daban JR

SASDED8 – Poly-L-Glutamic Acid in Dimethyl Sulfoxide (DMSO)

Poly-L-Glutamic Acid experimental SAS data
PYMOL model
Sample: Poly-L-Glutamic Acid, 6 kDa
Buffer: Dimethyl Sulfoxide (DMSO), pH:
Experiment: SAXS data collected at EMBL P12, PETRA III on 2017 Dec 11
β2-Type Amyloidlike Fibrils of Poly-l-glutamic Acid Convert into Long, Highly Ordered Helices upon Dissolution in Dimethyl Sulfoxide. J Phys Chem B 122(50):11895-11905 (2018)
Berbeć S, Dec R, Molodenskiy D, Wielgus-Kutrowska B, Johannessen C, Hernik-Magoń A, Tobias F, Bzowska A, Ścibisz G, Keiderling TA, Svergun D, Dzwolak W
RgGuinier 1.8 nm
Dmax 7.8 nm
VolumePorod 5 nm3

SASDMX8 – Iron oxide nanoparticles (NP-N2) (30% of 9 kDa PEG tails)

Iron oxide nanoparticles (NP-N2) (30% of 9 kDa PEG tails) experimental SAS data
OTHER [STATIC IMAGE] model
Sample: Iron oxide nanoparticles (NP-N2) (30% of 9 kDa PEG tails) 0, 5000 kDa
Buffer: 0.05 M Tris-HCl, 0.05 M NaCl, 0.01 M KCl, 0.005 M MgCl2, pH: 4.6
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2011 Jun 23
Coat Protein-Dependent Behavior of Poly(ethylene glycol) Tails in Iron Oxide Core Virus-like Nanoparticles. ACS Appl Mater Interfaces 7(22):12089-98 (2015)
Malyutin AG, Cheng H, Sanchez-Felix OR, Carlson K, Stein BD, Konarev PV, Svergun DI, Dragnea B, Bronstein LM
Dmax 25.0 nm

SASDMY8 – Iron oxide nanoparticles (NP-N3) (60% of 9 kDa PEG tails)

Iron oxide nanoparticles (NP-N3) (60% of 9 kDa PEG tails) experimental SAS data
OTHER [STATIC IMAGE] model
Sample: Iron oxide nanoparticles (NP-N3) (60% of 9 kDa PEG tails) 0, 5000 kDa
Buffer: 0.05 M Tris-HCl, 0.05 M NaCl, 0.01 M KCl, 0.005 M MgCl2, pH: 4.5
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2011 Jun 23
Coat Protein-Dependent Behavior of Poly(ethylene glycol) Tails in Iron Oxide Core Virus-like Nanoparticles. ACS Appl Mater Interfaces 7(22):12089-98 (2015)
Malyutin AG, Cheng H, Sanchez-Felix OR, Carlson K, Stein BD, Konarev PV, Svergun DI, Dragnea B, Bronstein LM
Dmax 26.0 nm

SASDMZ8 – Iron oxide nanoparticles (NP-P3) (60% of 5 kDa PEG tails)

Iron oxide nanoparticles (NP-P3) (60% of 5 kDa PEG tails) experimental SAS data
OTHER [STATIC IMAGE] model
Sample: Iron oxide nanoparticles (NP-P3) (60% of 5 kDa PEG tails) 0, 5000 kDa
Buffer: 0.05 M Tris-HCl, 0.05 M NaCl, 0.01 M KCl, 0.005 M MgCl2, pH: 4.5
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2011 Jun 23
Coat Protein-Dependent Behavior of Poly(ethylene glycol) Tails in Iron Oxide Core Virus-like Nanoparticles. ACS Appl Mater Interfaces 7(22):12089-98 (2015)
Malyutin AG, Cheng H, Sanchez-Felix OR, Carlson K, Stein BD, Konarev PV, Svergun DI, Dragnea B, Bronstein LM
Dmax 26.0 nm