Browse by MACROMOLECULE type: protein

SASDFZ4 – R16-24 human dystrophin fragment

Human dystrophin central domain R16-24 fragment experimental SAS data
Human dystrophin central domain R16-24 fragment Kratky plot
Sample: Human dystrophin central domain R16-24 fragment monomer, 127 kDa protein
Buffer: NaP 20 mM, NaCl 300 mM, EDTA 1 mM, Glycérol 2%, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2016 Dec 17
Dystrophin SAXS data
Raphael Dos Santos Morais
RgGuinier 9.3 nm
Dmax 34.0 nm

SASDF25 – R16-24 del45-55 human dystrophin fragment

Human dystrophin central domain R16-24 del45-55 fragment experimental SAS data
Human dystrophin central domain R16-24 del45-55 fragment Kratky plot
Sample: Human dystrophin central domain R16-24 del45-55 fragment monomer, 58 kDa protein
Buffer: NaP 20 mM, NaCl 300 mM, EDTA 1 mM, Glycérol 2%, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2017 Sep 28
Dystrophin SAXS data
Raphael Dos Santos Morais
RgGuinier 4.7 nm
Dmax 18.3 nm

SASDF35 – R16-24 del45-51 human dystrophin fragment

Human dystrophin central domain R16-24 del45-51 fragment experimental SAS data
Human dystrophin central domain R16-24 del45-51 fragment Kratky plot
Sample: Human dystrophin central domain R16-24 del45-51 fragment monomer, 85 kDa protein
Buffer: NaP 20 mM, NaCl 300 mM, EDTA 1 mM, Glycérol 2%, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2017 Jul 13
Dystrophin SAXS data
Raphael Dos Santos Morais
RgGuinier 7.0 nm
Dmax 26.2 nm

SASDGM2 – R16-24 del44-54 human dystrophin fragment

Human dystrophin central domain R16-24 del44-54 fragment experimental SAS data
Human dystrophin central domain R16-24 del44-54 fragment Kratky plot
Sample: Human dystrophin central domain R16-24 del44-54 fragment monomer, 57 kDa Homo sapiens protein
Buffer: 20 mM Na-phosphate, 300 mM NaCl, 1 mM EDTA, 2% glycerol,, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2019 Jul 8
Dystrophin SAXS data
Raphael Dos Santos Morais
RgGuinier 6.4 nm
Dmax 25.0 nm
VolumePorod 159 nm3

SASDRA6 – Cell division protein FtsQ N-terminal soluble domain

Cell division protein FtsQ experimental SAS data
Cell division protein FtsQ Kratky plot
Sample: Cell division protein FtsQ monomer, 11 kDa Mycobacterium tuberculosis (strain … protein
Buffer: 20 mM phosphate buffer, 25 mM NaCl, pH: 6.5
Experiment: SAXS data collected at 5-ID-D DND-CAT, Advanced Photon Source (APS), Argonne National Laboratory on 2017 Jun 28
An Arg/Ala-rich helix in the N-terminal region of M. tuberculosis FtsQ is a potential membrane anchor of the Z-ring. Commun Biol 6(1):311 (2023)
Smrt ST, Escobar CA, Dey S, Cross TA, Zhou HX
RgGuinier 2.6 nm
Dmax 8.5 nm
VolumePorod 21 nm3

SASDQ59 – Mutant 7-deazapurine in DNA protein A (D95A)

DNA-guanine transglycosylase - D95A mutant experimental SAS data
GROMACS model
Sample: DNA-guanine transglycosylase - D95A mutant monomer, 50 kDa Salmonella enterica subsp. … protein
Buffer: 100 mM KCl, 50 mM Tris pH 7.0, 1 mM DTT, pH: 7
Experiment: SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2021 Dec 22
7-Deazaguanines in DNA: functional and structural elucidation of a DNA modification system. Nucleic Acids Res (2023)
Gedara SH, Wood E, Gustafson A, Liang C, Hung SH, Savage J, Phan P, Luthra A, de Crécy-Lagard V, Dedon P, Swairjo MA, Iwata-Reuyl D
RgGuinier 2.7 nm
Dmax 10.1 nm
VolumePorod 67 nm3

SASDQ89 – 7-deazapurine in DNA protein B

DGQHR domain-containing protein experimental SAS data
ALPHAFOLD model
Sample: DGQHR domain-containing protein dimer, 88 kDa Salmonella enterica subsp. … protein
Buffer: 100 mM KCl, 50 mM Tris pH 7.0, 1 mM DTT, pH: 7
Experiment: SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2021 Dec 22
7-Deazaguanines in DNA: functional and structural elucidation of a DNA modification system. Nucleic Acids Res (2023)
Gedara SH, Wood E, Gustafson A, Liang C, Hung SH, Savage J, Phan P, Luthra A, de Crécy-Lagard V, Dedon P, Swairjo MA, Iwata-Reuyl D
RgGuinier 3.4 nm
Dmax 13.5 nm
VolumePorod 126 nm3

SASDPC7 – Ordered core SD1 domain of KNR4

Cell wall assembly regulator SMI1 experimental SAS data
DAMMIN model
Sample: Cell wall assembly regulator SMI1 monomer, 31 kDa Saccharomyces cerevisiae (strain … protein
Buffer: 100 mM MES, 300 mM NaCl, pH: 6
Experiment: SAXS data collected at BM29, ESRF on 2016 Mar 18
The conserved yeast protein Knr4 involved in cell wall integrity is a multi-domain intrinsically disordered protein. J Mol Biol :168048 (2023)
Batista M, Donker EIM, Bon C, Guillien M, Caisso A, Mourey Funding L, Marie François Funding J, Maveyraud L, Zerbib D
RgGuinier 2.3 nm
Dmax 8.0 nm
VolumePorod 62 nm3

SASDPD7 – C-terminal truncated KNR4

Cell wall assembly regulator SMI1 experimental SAS data
DAMMIN model
Sample: Cell wall assembly regulator SMI1 monomer, 40 kDa Saccharomyces cerevisiae (strain … protein
Buffer: 100 mM MES, 300 mM NaCl, pH: 6
Experiment: SAXS data collected at BM29, ESRF on 2017 Mar 4
The conserved yeast protein Knr4 involved in cell wall integrity is a multi-domain intrinsically disordered protein. J Mol Biol :168048 (2023)
Batista M, Donker EIM, Bon C, Guillien M, Caisso A, Mourey Funding L, Marie François Funding J, Maveyraud L, Zerbib D
RgGuinier 2.8 nm
Dmax 11.0 nm
VolumePorod 79 nm3

SASDPE7 – Full length KNR4

Cell wall assembly regulator SMI1 experimental SAS data
DAMMIN model
Sample: Cell wall assembly regulator SMI1 monomer, 57 kDa Saccharomyces cerevisiae (strain … protein
Buffer: 100 mM MES, 300 mM NaCl, pH: 6
Experiment: SAXS data collected at BM29, ESRF on 2016 Mar 7
The conserved yeast protein Knr4 involved in cell wall integrity is a multi-domain intrinsically disordered protein. J Mol Biol :168048 (2023)
Batista M, Donker EIM, Bon C, Guillien M, Caisso A, Mourey Funding L, Marie François Funding J, Maveyraud L, Zerbib D
RgGuinier 4.8 nm
Dmax 17.0 nm
VolumePorod 117 nm3