Small Angle Scattering Biological Data Bank SASBDB

Browse by MACROMOLECULE type: protein

SASDMR5 – Tn3 family transposase (TnpA WT)

Sample:	TnpA transposase dimer, 234 kDa Bacillus thuringiensis serovar … protein
Buffer:	50 mM HEPES, 200 mM NaCl, 100 mM L-Arg HCL, pH: 7.9
Experiment:	SAXS data collected at SWING, SOLEIL on 2017 Nov 2

AFM-based force spectroscopy unravels stepwise formation of the DNA transposition complex in the widespread Tn3 family mobile genetic elements. Nucleic Acids Res (2023)
Fernandez M, Shkumatov AV, Liu Y, Stulemeijer C, Derclaye S, Efremov RG, Hallet B, Alsteens D

R_g^Guinier	4.6	nm
D_max	16.0	nm
Volume^Porod	480	nm³

SASDS57 – Heterotrimeric membrane protein complex FtsB-FtsL-FtsQ

Cell division protein FtsBCell division protein FtsLCell division protein FtsQ experimental SAS data

Sample:	Cell division protein FtsB hexamer, 70 kDa Escherichia coli (strain … protein Cell division protein FtsL hexamer, 82 kDa Escherichia coli (strain … protein Cell division protein FtsQ hexamer, 189 kDa Escherichia coli (strain … protein
Buffer:	20 mM HEPES pH 7.5, 200 mM NaCl, 0.2% of Cymal-5, pH: 7.5
Experiment:	SAXS data collected at 13A, Taiwan Photon Source, NSRRC on 2022 Sep 23

Structure of the heterotrimeric membrane protein complex FtsB-FtsL-FtsQ of the bacterial divisome Nature Communications 14(1) (2023)
Nguyen H, Chen X, Parada C, Luo A, Shih O, Jeng U, Huang C, Shih Y, Ma C

R_g^Guinier	5.3	nm
D_max	16.5	nm
Volume^Porod	421	nm³

SASDQG4 – Rabies virus Nishigahara strain Phosphoprotein Isoform 3 (P3)

Isoform P3 of Phosphoprotein experimental SAS data

Rabies virus Nishigahara strain Phosphoprotein Isoform 3 (P3) Rg histogram

Sample:	Isoform P3 of Phosphoprotein dimer, 55 kDa Rabies virus (strain … protein
Buffer:	25 mM HEPES, 150 mM NaCl, 1 mM TCEP, pH: 7.4
Experiment:	SAXS data collected at SAXS/WAXS, Australian Synchrotron on 2019 Jun 26

Structural insights into the multifunctionality of rabies virus P3 protein. Proc Natl Acad Sci U S A 120(14):e2217066120 (2023)
Sethi A, Rawlinson SM, Dubey A, Ang CS, Choi YH, Yan F, Okada K, Rozario AM, Brice AM, Ito N, Williamson NA, Hatters DM, Bell TDM, Arthanari H, Moseley GW, Gooley PR

R_g^Guinier	3.7	nm
D_max	16.5	nm
Volume^Porod	108	nm³

SASDQH4 – Attenuated Nishigahara Phosphoprotein Isoform 3 (Ni-CE P3)

Attenuated derivative P3 of Phosphoprotein experimental SAS data

Attenuated Nishigahara Phosphoprotein Isoform 3 (Ni-CE P3) Rg histogram

Sample:	Attenuated derivative P3 of Phosphoprotein dimer, 55 kDa protein
Buffer:	25 mM HEPES, 150 mM NaCl, 1 mM TCEP, pH: 7.4
Experiment:	SAXS data collected at SAXS/WAXS, Australian Synchrotron on 2019 Jun 26

R_g^Guinier	4.0	nm
D_max	17.5	nm
Volume^Porod	127	nm³

SASDQJ4 – N226H Nishigahara Phosphoprotein Isoform 3 (N226H_P3)

Isoform P3 of Phosphoprotein Nish P3 N226H experimental SAS data

N226H Nishigahara Phosphoprotein Isoform 3 (N226H_P3) Rg histogram

Sample:	Isoform P3 of Phosphoprotein Nish P3 N226H dimer, 55 kDa protein
Buffer:	25 mM HEPES, 150 mM NaCl, 1 mM TCEP, pH: 7.4
Experiment:	SAXS data collected at SAXS/WAXS, Australian Synchrotron on 2019 Jun 26

R_g^Guinier	4.3	nm
D_max	19.0	nm
Volume^Porod	150	nm³

SASDPV6 – Calmodulin

Sample:	Calmodulin-1 monomer, 17 kDa Homo sapiens protein
Buffer:	50 mM HEPES, 100 mM NaCl, 2 mM CaCl2, 1 mM TCEP, pH: 7.4
Experiment:	SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2021 Sep 23

Binding by calmodulin is coupled to transient unfolding of the third FF domain of Prp40A. Protein Sci 32(4):e4606 (2023)
Díaz Casas A, Cordoba JJ, Ferrer BJ, Balakrishnan S, Wurm JE, Pastrana-Ríos B, Chazin WJ

R_g^Guinier	2.2	nm
D_max	7.0	nm
Volume^Porod	38	nm³

SASDPW6 – FF3 domain of pre-mRNA-processing factor 40 homolog A (Prp40A)

Pre-mRNA-processing factor 40 homolog A experimental SAS data

Sample:	Pre-mRNA-processing factor 40 homolog A monomer, 9 kDa Homo sapiens protein
Buffer:	50 mM HEPES, 100 mM NaCl, 2 mM CaCl2, 1 mM TCEP, pH: 7.4
Experiment:	SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2021 Sep 23

R_g^Guinier	1.6	nm
D_max	7.2	nm
Volume^Porod	13	nm³

SASDPX6 – Calmodulin bound to the FF3 domain of pre-mRNA-processing factor 40 homolog A (Prp40A)

Calmodulin-1Pre-mRNA-processing factor 40 homolog A experimental SAS data

Sample:	Calmodulin-1 monomer, 17 kDa Homo sapiens protein Pre-mRNA-processing factor 40 homolog A monomer, 9 kDa Homo sapiens protein
Buffer:	50 mM HEPES, 100 mM NaCl, 2 mM CaCl2, 1 mM TCEP, pH: 7.4
Experiment:	SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2021 Sep 23

R_g^Guinier	2.4	nm
D_max	8.7	nm
Volume^Porod	29	nm³

SASDQ87 – Solution structure of colibactin ClbK

Colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbK experimental SAS data

Colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbK Kratky plot

Sample:	Colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbK dimer, 476 kDa Escherichia coli protein
Buffer:	50 mM Hepes pH 7.5, 200 mM NaCl, 5 mM DTT, 5 mM MgCl2, pH: 7.5
Experiment:	SAXS data collected at BM29, ESRF on 2020 Sep 14

Architecture of a PKS-NRPS hybrid megaenzyme involved in the biosynthesis of the genotoxin colibactin Structure (2023)
Bonhomme S, Contreras-Martel C, Dessen A, Macheboeuf P

R_g^Guinier	8.0	nm
D_max	30.0	nm
Volume^Porod	1340	nm³

SASDFY4 – R4-15 human dystrophin fragment

Human dystrophin central domain R4-15 fragment experimental SAS data

Human dystrophin central domain R4-15 fragment Kratky plot

Sample:	Human dystrophin central domain R4-15 fragment monomer, 150 kDa protein
Buffer:	NaP 20 mM, NaCl 300 mM, EDTA 1 mM, Glycérol 2%, pH: 7.5
Experiment:	SAXS data collected at SWING, SOLEIL on 2016 May 26

Dystrophin SAXS data
Raphael Dos Santos Morais

R_g^Guinier	9.7	nm
D_max	47.5	nm

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