Browse by MACROMOLECULE type: protein

SASDCQ2 – 4Ca2+-calmodulin - Xenopus laevis

Calmodulin-1 experimental SAS data
4Ca2+-calmodulin - Xenopus laevis Rg histogram
Sample: Calmodulin-1 monomer, 17 kDa Xenopus laevis protein
Buffer: 25 mM MOPS, 250 mM NaCl, 50 mM KCl, 2 mM TCEP, 0.1% NaN3, pH: 7.5
Experiment: SAXS data collected at SAXS/WAXS, Australian Synchrotron on 2017 Mar 9
2017 publication guidelines for structural modelling of small-angle scattering data from biomolecules in solution: an update. Acta Crystallogr D Struct Biol 73(Pt 9):710-728 (2017)
Trewhella J, Duff AP, Durand D, Gabel F, Guss JM, Hendrickson WA, Hura GL, Jacques DA, Kirby NM, Kwan AH, Pérez J, Pollack L, Ryan TM, Sali A, Schneidman-Duhovny D, Schwede T, Svergun DI, Sugiyama M, Tainer JA, Vachette P, Westbrook J, Whitten AE
RgGuinier 2.2 nm
Dmax 7.2 nm
VolumePorod 25 nm3

SASDCJ3 – Bovine Serum Albumin

Serum albumin experimental SAS data
DAMMIN model
Sample: Serum albumin monomer, 66 kDa Bos taurus protein
Buffer: 25 mM MOPS, 250 mM NaCl, 50 mM KCl, 2 mM TCEP, 0.1% NaN3, pH: 7.5
Experiment: SAXS data collected at SAXS/WAXS, Australian Synchrotron on 2017 Mar 9
2017 publication guidelines for structural modelling of small-angle scattering data from biomolecules in solution: an update. Acta Crystallogr D Struct Biol 73(Pt 9):710-728 (2017)
Trewhella J, Duff AP, Durand D, Gabel F, Guss JM, Hendrickson WA, Hura GL, Jacques DA, Kirby NM, Kwan AH, Pérez J, Pollack L, Ryan TM, Sali A, Schneidman-Duhovny D, Schwede T, Svergun DI, Sugiyama M, Tainer JA, Vachette P, Westbrook J, Whitten AE
RgGuinier 2.8 nm
Dmax 8.7 nm
VolumePorod 101 nm3

SASDCP3 – Proline utilization A from Bdellovibrio bacteriovorus

Bifunctional protein PutA experimental SAS data
DAMMIF model
Sample: Bifunctional protein PutA dimer, 219 kDa Bdellovibrio bacteriovorus protein
Buffer: 50 mM Tris, 125 mM NaCl, 1 mM EDTA, and 1 mM tris(3-hydroxypropyl)phosphine (THP) at pH 7.5,, pH: 7.5
Experiment: SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2012 Jun 8
Biophysical investigation of type A PutAs reveals a conserved core oligomeric structure. FEBS J 284(18):3029-3049 (2017)
Korasick DA, Singh H, Pemberton TA, Luo M, Dhatwalia R, Tanner JJ
RgGuinier 4.5 nm
Dmax 14.0 nm
VolumePorod 287 nm3

SASDCQ3 – Proline utilization A from Desulfovibrio vulgaris 1.5 mg/mL

Bifunctional protein PutA experimental SAS data
Bifunctional protein PutA Kratky plot
Sample: Bifunctional protein PutA dimer, 229 kDa Desulfovibrio vulgaris protein
Buffer: 50 mM Tris-HCl, 50 mM NaCl, 0.5 mM EDTA, and 0.5 mM THP at pH 7.5., pH: 7.5
Experiment: SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2012 Jun 8
Biophysical investigation of type A PutAs reveals a conserved core oligomeric structure. FEBS J 284(18):3029-3049 (2017)
Korasick DA, Singh H, Pemberton TA, Luo M, Dhatwalia R, Tanner JJ
RgGuinier 4.4 nm
Dmax 16.0 nm
VolumePorod 293 nm3

SASDCR3 – Proline utilization A from Legionella pneumophila 3 mg/mL

Bifunctional protein PutA experimental SAS data
Bifunctional protein PutA Kratky plot
Sample: Bifunctional protein PutA dimer, 238 kDa Legionella pneumophila subsp. … protein
Buffer: 50 mM Tris-HCl, 50 mM NaCl, 0.5 mM EDTA, and 0.5 mM THP at pH 7.5., pH: 7.5
Experiment: SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2010 Apr 20
Biophysical investigation of type A PutAs reveals a conserved core oligomeric structure. FEBS J 284(18):3029-3049 (2017)
Korasick DA, Singh H, Pemberton TA, Luo M, Dhatwalia R, Tanner JJ
RgGuinier 4.6 nm
Dmax 16.0 nm
VolumePorod 291 nm3

SASDCS3 – Proline utilization A from Bradyrhizobium diazoefficiens (formerly Bradyrhizobium japonicum) 2.3 mg/mL

Proline dehydrogenase experimental SAS data
Proline dehydrogenase Kratky plot
Sample: Proline dehydrogenase tetramer, 430 kDa Bradyrhizobium diazoefficiens protein
Buffer: 50 mM Tris (pH 7.8), 50 mM NaCl, 0.5 mM Tris(2-carboxyethyl)phosphine, and 5% (v/v) glycerol, pH: 7.8
Experiment: SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2016 Dec 16
Biophysical investigation of type A PutAs reveals a conserved core oligomeric structure. FEBS J 284(18):3029-3049 (2017)
Korasick DA, Singh H, Pemberton TA, Luo M, Dhatwalia R, Tanner JJ
RgGuinier 5.3 nm
Dmax 14.1 nm
VolumePorod 541 nm3

SASDCT3 – Proline utilization A from Bradyrhizobium diazoefficiens (formerly Bradyrhizobium japonicum) 4.7 mg/mL

Proline dehydrogenase experimental SAS data
Proline dehydrogenase Kratky plot
Sample: Proline dehydrogenase tetramer, 430 kDa Bradyrhizobium diazoefficiens protein
Buffer: 50 mM Tris (pH 7.8), 50 mM NaCl, 0.5 mM Tris(2-carboxyethyl)phosphine, and 5% (v/v) glycerol, pH: 7.8
Experiment: SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2016 Dec 12
Biophysical investigation of type A PutAs reveals a conserved core oligomeric structure. FEBS J 284(18):3029-3049 (2017)
Korasick DA, Singh H, Pemberton TA, Luo M, Dhatwalia R, Tanner JJ
RgGuinier 5.2 nm
Dmax 14.6 nm
VolumePorod 553 nm3

SASDCU3 – Proline utilization A from Bradyrhizobium diazoefficiens (formerly Bradyrhizobium japonicum) 7.0 mg/mL

Proline dehydrogenase experimental SAS data
DAMMIF model
Sample: Proline dehydrogenase tetramer, 430 kDa Bradyrhizobium diazoefficiens protein
Buffer: 50 mM Tris (pH 7.8), 50 mM NaCl, 0.5 mM Tris(2-carboxyethyl)phosphine, and 5% (v/v) glycerol, pH: 7.8
Experiment: SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2016 Dec 12
Biophysical investigation of type A PutAs reveals a conserved core oligomeric structure. FEBS J 284(18):3029-3049 (2017)
Korasick DA, Singh H, Pemberton TA, Luo M, Dhatwalia R, Tanner JJ
RgGuinier 5.2 nm
Dmax 13.7 nm
VolumePorod 560 nm3

SASDCV3 – Proline utilization A from Legionella pneumophila 5 mg/mL

Bifunctional protein PutA experimental SAS data
Bifunctional protein PutA Kratky plot
Sample: Bifunctional protein PutA dimer, 238 kDa Legionella pneumophila subsp. … protein
Buffer: 50 mM Tris-HCl, 50 mM NaCl, 0.5 mM EDTA, and 0.5 mM THP at pH 7.5., pH: 7.5
Experiment: SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2010 Apr 20
Biophysical investigation of type A PutAs reveals a conserved core oligomeric structure. FEBS J 284(18):3029-3049 (2017)
Korasick DA, Singh H, Pemberton TA, Luo M, Dhatwalia R, Tanner JJ
RgGuinier 4.6 nm
Dmax 15.3 nm
VolumePorod 297 nm3

SASDCW3 – Proline utilization A from Legionella pneumophila 8 mg/mL

Bifunctional protein PutA experimental SAS data
DAMMIF model
Sample: Bifunctional protein PutA dimer, 238 kDa Legionella pneumophila subsp. … protein
Buffer: 50 mM Tris-HCl, 50 mM NaCl, 0.5 mM EDTA, and 0.5 mM THP at pH 7.5., pH: 7.5
Experiment: SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2010 Apr 20
Biophysical investigation of type A PutAs reveals a conserved core oligomeric structure. FEBS J 284(18):3029-3049 (2017)
Korasick DA, Singh H, Pemberton TA, Luo M, Dhatwalia R, Tanner JJ
RgGuinier 4.6 nm
Dmax 15.5 nm
VolumePorod 295 nm3