Browse by ORGANISM: Mus musculus (Mouse)

SASDSU8 – Threonine aldolase 1 tetramer at neutral pH

L-threonine aldolase experimental SAS data
PHENIX model
Sample: L-threonine aldolase tetramer, 165 kDa Mus musculus protein
Buffer: 20 mM Tris, 150 mM NaCl, 1 mM EDTA, 1 mM DTT, pH: 7.8
Experiment: SAXS data collected at BM29, ESRF on 2023 Feb 14
One substrate many enzymes virtual screening uncovers missing genes of carnitine biosynthesis in human and mouse. Nat Commun 15(1):3199 (2024)
Malatesta M, Fornasier E, Di Salvo ML, Tramonti A, Zangelmi E, Peracchi A, Secchi A, Polverini E, Giachin G, Battistutta R, Contestabile R, Percudani R
RgGuinier 3.7 nm
Dmax 10.6 nm
VolumePorod 209 nm3

SASDT35 – N-cadherin extracellular domains EC1-EC5

Cadherin-2 experimental SAS data
Cadherin-2 Kratky plot
Sample: Cadherin-2 dimer, 123 kDa Mus musculus protein
Buffer: 10 mM HEPES, 150 mM NaCl, 3 mM CaCl2, 0.02% NaN3, pH: 8
Experiment: SAXS data collected at 13A, Taiwan Photon Source, NSRRC on 2023 May 1
Rapid simulation of glycoprotein structures by grafting and steric exclusion of glycan conformer libraries. Cell 187(5):1296-1311.e26 (2024)
Tsai YX, Chang NE, Reuter K, Chang HT, Yang TJ, von Bülow S, Sehrawat V, Zerrouki N, Tuffery M, Gecht M, Grothaus IL, Colombi Ciacchi L, Wang YS, Hsu MF, Khoo KH, Hummer G, Hsu SD, Hanus C, Sikora M
RgGuinier 8.8 nm
Dmax 40.0 nm
VolumePorod 496 nm3

SASDT45 – N-cadherin extracellular domains EC4-EC5

Cadherin-2 experimental SAS data
Cadherin-2 Kratky plot
Sample: Cadherin-2 monomer, 24 kDa Mus musculus protein
Buffer: 10 mM HEPES, 150 mM NaCl, 3 mM CaCl2, 0.02% NaN3, pH: 8
Experiment: SAXS data collected at 13A, Taiwan Photon Source, NSRRC on 2023 May 1
Rapid simulation of glycoprotein structures by grafting and steric exclusion of glycan conformer libraries. Cell 187(5):1296-1311.e26 (2024)
Tsai YX, Chang NE, Reuter K, Chang HT, Yang TJ, von Bülow S, Sehrawat V, Zerrouki N, Tuffery M, Gecht M, Grothaus IL, Colombi Ciacchi L, Wang YS, Hsu MF, Khoo KH, Hummer G, Hsu SD, Hanus C, Sikora M
RgGuinier 3.4 nm
Dmax 12.6 nm
VolumePorod 63 nm3

SASDT76 – Neurofilament low intrinsically disordered tail domain aggregate - 2.68 mg/ml - 20 mM Tris pH 8.0

Neurofilament light polypeptide (T445N; C-terminus, amino acids 399-553) experimental SAS data
Neurofilament light polypeptide (T445N; C-terminus, amino acids 399-553) Kratky plot
Sample: Neurofilament light polypeptide (T445N; C-terminus, amino acids 399-553), 16 kDa Mus musculus protein
Buffer: 20 mM Tris, pH: 8
Experiment: SAXS data collected at EMBL P12, PETRA III on 2023 Sep 7
From isolated polyelectrolytes to star-like assemblies: the role of sequence heterogeneity on the statistical structure of the intrinsically disordered neurofilament-low tail domain. Eur Phys J E Soft Matter 47(2):13 (2024)
Kravikass M, Koren G, Saleh OA, Beck R
RgGuinier 26.4 nm

SASDT86 – Neurofilament low intrinsically disordered tail domain aggregate - 1.80 mg/ml - 20 mM Tris pH 8.0

Neurofilament light polypeptide (T445N; C-terminus, amino acids 399-553) experimental SAS data
Neurofilament light polypeptide (T445N; C-terminus, amino acids 399-553) Kratky plot
Sample: Neurofilament light polypeptide (T445N; C-terminus, amino acids 399-553), 16 kDa Mus musculus protein
Buffer: 20 mM Tris, pH: 8
Experiment: SAXS data collected at EMBL P12, PETRA III on 2023 Sep 7
From isolated polyelectrolytes to star-like assemblies: the role of sequence heterogeneity on the statistical structure of the intrinsically disordered neurofilament-low tail domain. Eur Phys J E Soft Matter 47(2):13 (2024)
Kravikass M, Koren G, Saleh OA, Beck R
RgGuinier 21.9 nm

SASDT96 – Neurofilament low intrinsically disordered tail domain aggregate - 1.00 mg/ml - 20 mM Tris pH 8.0

Neurofilament light polypeptide (T445N; C-terminus, amino acids 399-553) experimental SAS data
Neurofilament light polypeptide (T445N; C-terminus, amino acids 399-553) Kratky plot
Sample: Neurofilament light polypeptide (T445N; C-terminus, amino acids 399-553), 16 kDa Mus musculus protein
Buffer: 20 mM Tris, pH: 8
Experiment: SAXS data collected at EMBL P12, PETRA III on 2023 Sep 7
From isolated polyelectrolytes to star-like assemblies: the role of sequence heterogeneity on the statistical structure of the intrinsically disordered neurofilament-low tail domain. Eur Phys J E Soft Matter 47(2):13 (2024)
Kravikass M, Koren G, Saleh OA, Beck R
RgGuinier 22.9 nm

SASDTA6 – Neurofilament low intrinsically disordered tail domain aggregate - 0.50 mg/ml - 20 mM Tris pH 8.0

Neurofilament light polypeptide (T445N; C-terminus, amino acids 399-553) experimental SAS data
Neurofilament light polypeptide (T445N; C-terminus, amino acids 399-553) Kratky plot
Sample: Neurofilament light polypeptide (T445N; C-terminus, amino acids 399-553), 16 kDa Mus musculus protein
Buffer: 20 mM Tris, pH: 8
Experiment: SAXS data collected at EMBL P12, PETRA III on 2023 Sep 7
From isolated polyelectrolytes to star-like assemblies: the role of sequence heterogeneity on the statistical structure of the intrinsically disordered neurofilament-low tail domain. Eur Phys J E Soft Matter 47(2):13 (2024)
Kravikass M, Koren G, Saleh OA, Beck R
RgGuinier 22.6 nm

SASDTB6 – Neurofilament low intrinsically disordered tail domain aggregate - 1.3 mg/ml - 20 mM Tris pH 8.0, 150 mM NaCl

Neurofilament light polypeptide (T445N; C-terminus, amino acids 399-553) experimental SAS data
Neurofilament light polypeptide (T445N; C-terminus, amino acids 399-553) Kratky plot
Sample: Neurofilament light polypeptide (T445N; C-terminus, amino acids 399-553), 16 kDa Mus musculus protein
Buffer: 20 mM Tris pH 8.00, 150 mM NaCl, pH:
Experiment: SAXS data collected at EMBL P12, PETRA III on 2023 Sep 7
From isolated polyelectrolytes to star-like assemblies: the role of sequence heterogeneity on the statistical structure of the intrinsically disordered neurofilament-low tail domain. Eur Phys J E Soft Matter 47(2):13 (2024)
Kravikass M, Koren G, Saleh OA, Beck R
RgGuinier 17.8 nm

SASDTC6 – Neurofilament low intrinsically disordered tail domain aggregate - 0.73 mg/ml - 20 mM Tris pH 8.0, 150 mM NaCl

Neurofilament light polypeptide (T445N; C-terminus, amino acids 399-553) experimental SAS data
Neurofilament light polypeptide (T445N; C-terminus, amino acids 399-553) Kratky plot
Sample: Neurofilament light polypeptide (T445N; C-terminus, amino acids 399-553), 16 kDa Mus musculus protein
Buffer: 20 mM Tris pH 8.00, 150 mM NaCl, pH:
Experiment: SAXS data collected at EMBL P12, PETRA III on 2023 Sep 7
From isolated polyelectrolytes to star-like assemblies: the role of sequence heterogeneity on the statistical structure of the intrinsically disordered neurofilament-low tail domain. Eur Phys J E Soft Matter 47(2):13 (2024)
Kravikass M, Koren G, Saleh OA, Beck R
RgGuinier 19.4 nm

SASDTD6 – Neurofilament low intrinsically disordered tail domain aggregate - 0.57 mg/ml - 20 mM Tris pH 8.0, 150 mM NaCl

Neurofilament light polypeptide (T445N; C-terminus, amino acids 399-553) experimental SAS data
Neurofilament light polypeptide (T445N; C-terminus, amino acids 399-553) Kratky plot
Sample: Neurofilament light polypeptide (T445N; C-terminus, amino acids 399-553), 16 kDa Mus musculus protein
Buffer: 20 mM Tris pH 8.00, 150 mM NaCl, pH:
Experiment: SAXS data collected at EMBL P12, PETRA III on 2023 Sep 7
From isolated polyelectrolytes to star-like assemblies: the role of sequence heterogeneity on the statistical structure of the intrinsically disordered neurofilament-low tail domain. Eur Phys J E Soft Matter 47(2):13 (2024)
Kravikass M, Koren G, Saleh OA, Beck R
RgGuinier 22.2 nm