Small Angle Scattering Biological Data Bank SASBDB

Browse by ORGANISM: Mus musculus (Mouse)

SASDVD6 – The Ig-like C2-type 4 domain (Ig4WT) of Palladin

Sample:	Palladin monomer, 12 kDa Mus musculus protein
Buffer:	20 mM HEPES pH 7.4, 1 mM DTT, 100 mM NaCl, pH:
Experiment:	SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2023 Aug 29

Integrated structural model of the palladin-actin complex using XL-MS, docking, NMR, and SAXS. Protein Sci 34(5):e70122 (2025)
Sargent R, Liu DH, Yadav R, Glennenmeier D, Bradford C, Urbina N, Beck MR

R_g^Guinier	1.7	nm
D_max	6.8	nm
Volume^Porod	18	nm³

SASDVE6 – The Ig-like C2-type 3 domain (Ig3WT) of Palladin

Sample:	Palladin monomer, 12 kDa Mus musculus protein
Buffer:	20 mM HEPES pH 7.4, 1 mM DTT, 100 mM NaCl, pH:
Experiment:	SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2023 Aug 29

R_g^Guinier	1.6	nm
D_max	6.7	nm
Volume^Porod	18	nm³

SASDVF6 – The Ig-like C2-type 3 and Ig-like C2-type 4 domains (Ig34WT) of Palladin

The Ig-like C2-type 3 and Ig-like C2-type 4 domains (Ig34WT) of Palladin Rg histogram

Sample:	Palladin monomer, 27 kDa Mus musculus protein
Buffer:	20 mM HEPES pH 7.4, 1 mM DTT, 100 mM NaCl, pH:
Experiment:	SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2023 Aug 29

R_g^Guinier	2.8	nm
D_max	12.3	nm
Volume^Porod	29	nm³

SASDVS7 – Cadherin EGF LAG seven-pass G-type receptor 1 (CELSR1) ECR without calcium

Cadherin EGF LAG seven-pass G-type receptor 1 experimental SAS data

Cadherin EGF LAG seven-pass G-type receptor 1 Kratky plot

Sample:	Cadherin EGF LAG seven-pass G-type receptor 1 monomer, 245 kDa Mus musculus protein
Buffer:	10 mM Tris, 150 mM NaCl, pH: 8.5
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2022 Dec 8

Structural basis for regulation of CELSR1 by a compact module in its extracellular region. Nat Commun 16(1):3972 (2025)
Bandekar SJ, Garbett K, Kordon SP, Dintzner EE, Li J, Shearer T, Sando RC, Araç D

R_g^Guinier	6.0	nm
D_max	22.5	nm
Volume^Porod	473	nm³

SASDVT7 – Cadherin EGF LAG seven-pass G-type receptor 1 (CELSR1) ECR with calcium

Sample:	Cadherin EGF LAG seven-pass G-type receptor 1 dimer, 491 kDa Mus musculus protein
Buffer:	10 mM Tris, 150 mM NaCl, 1 mM CaCl2, pH: 8.5
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2022 Dec 8

R_g^Guinier	16.2	nm
D_max	67.5	nm
Volume^Porod	722	nm³

SASDUA5 – Double-stranded RNA-binding domains of Interleukin enhancer-binding factor 3 (395-592)

Interleukin enhancer-binding factor 3 experimental SAS data

Sample:	Interleukin enhancer-binding factor 3 monomer, 21 kDa Mus musculus protein
Buffer:	20 mM HEPES, 150 mM NaCl, 1 mM DTT, pH: 7.5
Experiment:	SAXS data collected at B21, Diamond Light Source on 2017 Oct 23

Integrative structural analysis of NF45-NF90 heterodimers reveals architectural rearrangements and oligomerization on binding dsRNA. Nucleic Acids Res 53(6) (2025)
Winterbourne S, Jayachandran U, Zou J, Rappsilber J, Granneman S, Cook AG

R_g^Guinier	3.5	nm
D_max	12.6	nm
Volume^Porod	39	nm³

SASDUB5 – Heterodimer complex of domain-associated zinc finger domains of Interleukin enhancer-binding factor 2 (29-390) and Interleukin enhancer-binding factor 3 (1-381)

Interleukin enhancer-binding factor 3Interleukin enhancer-binding factor 2 experimental SAS data

Sample:	Interleukin enhancer-binding factor 3 monomer, 42 kDa Mus musculus protein Interleukin enhancer-binding factor 2 monomer, 40 kDa Mus musculus protein
Buffer:	20 mM HEPES, 150 mM NaCl, 1 mM DTT, pH: 7.5
Experiment:	SAXS data collected at B21, Diamond Light Source on 2017 Oct 23

R_g^Guinier	3.5	nm
D_max	12.6	nm
Volume^Porod	127	nm³

SASDUC5 – Interleukin enhancer-binding factor 3 (1-591) and Interleukin enhancer-binding factor 2 (1-390) heterodimer complex (SEC-SAXS 1)

Interleukin enhancer-binding factor 2Interleukin enhancer-binding factor 3 experimental SAS data

Sample:	Interleukin enhancer-binding factor 2 monomer, 44 kDa Homo sapiens protein Interleukin enhancer-binding factor 3 monomer, 66 kDa Mus musculus protein
Buffer:	20 mM HEPES, 150 mM NaCl, 1 mM DTT, pH: 7.5
Experiment:	SAXS data collected at B21, Diamond Light Source on 2023 May 9

R_g^Guinier	4.7	nm
D_max	17.1	nm
Volume^Porod	210	nm³

SASDUD5 – Interleukin enhancer-binding factor 3 (1-591) and Interleukin enhancer-binding factor 2 (1-390) heterodimer complex (SEC-SAXS 2)

Sample:	Interleukin enhancer-binding factor 3 monomer, 66 kDa Mus musculus protein Interleukin enhancer-binding factor 2 monomer, 44 kDa Homo sapiens protein
Buffer:	20 mM HEPES, 150 mM NaCl, 1 mM DTT, pH: 7.5
Experiment:	SAXS data collected at B21, Diamond Light Source on 2017 Oct 23

R_g^Guinier	4.7	nm
D_max	17.1	nm
Volume^Porod	210	nm³

SASDUE5 – Interleukin enhancer-binding factor 3 (1-591) and Interleukin enhancer-binding factor 2 (1-390) heterodimer complex oligomerised along 25mer of dsRNA in a 2:1 ratio

Interleukin enhancer-binding factor 2Interleukin enhancer-binding factor 325-mer dsRNAInterleukin enhancer-binding factor 2Interleukin enhancer-binding factor 3 experimental SAS data

Sample:	Interleukin enhancer-binding factor 2 monomer, 44 kDa Homo sapiens protein Interleukin enhancer-binding factor 3 monomer, 66 kDa Mus musculus protein 25-mer dsRNA monomer, 16 kDa RNA Interleukin enhancer-binding factor 2 monomer, 44 kDa Homo sapiens protein Interleukin enhancer-binding factor 3 monomer, 66 kDa Mus musculus protein
Buffer:	20 mM HEPES, 150 mM NaCl, 1 mM DTT, pH: 7.5
Experiment:	SAXS data collected at B21, Diamond Light Source on 2023 May 9

R_g^Guinier	5.7	nm
D_max	19.9	nm
Volume^Porod	453	nm³

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