Small Angle Scattering Biological Data Bank SASBDB

SASDPZ2 – SARS-CoV-2 non-structural protein 7-8 (nsp7-8) polyprotein dimer

Replicase polyprotein 1ab experimental SAS data

Sample:	Replicase polyprotein 1ab dimer, 63 kDa Severe acute respiratory … protein
Buffer:	50 mM Tris, 500 mM NaCl, 5% glycerol, and 1 mM TCEP, pH: 8
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2020 Oct 15

Biochemical and structural insights into SARS-CoV-2 polyprotein processing by Mpro. Sci Adv 8(49):eadd2191 (2022)
Yadav R, Courouble VV, Dey SK, Harrison JJEK, Timm J, Hopkins JB, Slack RL, Sarafianos SG, Ruiz FX, Griffin PR, Arnold E

R_g^Guinier	3.3	nm
D_max	11.8	nm
Volume^Porod	110	nm³

SASDP23 – SARS-CoV-2 non-structural protein 7-11 (nsp7-11) polyprotein monomer

Replicase polyprotein 1a experimental SAS data

Sample:	Replicase polyprotein 1a monomer, 60 kDa Severe acute respiratory … protein
Buffer:	20 mM HEPES, 10% glycerol, 500 mM NaCl, 5 mM DTT, pH: 7.5
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2021 Nov 14

R_g^Guinier	3.5	nm
D_max	15.6	nm
Volume^Porod	102	nm³

SASDP33 – SARS-CoV-2 non-structural protein 7-11 (nsp7-11) polyprotein dimer

Sample:	Replicase polyprotein 1a dimer, 119 kDa Severe acute respiratory … protein
Buffer:	20 mM HEPES, 10% glycerol, 500 mM NaCl, 5 mM DTT, pH: 7.5
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2021 Nov 14

R_g^Guinier	4.6	nm
D_max	19.1	nm
Volume^Porod	203	nm³

SASDLQ9 – Von Willebrand Factor C6 domain wildtype

von Willebrand factor C6 domain wild type experimental SAS data

von Willebrand factor C6 domain wild type Kratky plot

Sample:	von Willebrand factor C6 domain wild type monomer, 9 kDa Homo sapiens protein
Buffer:	20 mM Tris-HCl, 150 mM NaCl, pH: 7.5
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2016 Dec 11

Structure and dynamics of the von Willebrand Factor C6 domain Journal of Structural Biology 214(4):107923 (2022)
Chen P, Kutzki F, Mojzisch A, Simon B, Xu E, Aponte-Santamaría C, Horny K, Jeffries C, Schneppenheim R, Wilmanns M, Brehm M, Gräter F, Hennig J

R_g^Guinier	1.7	nm
D_max	6.6	nm
Volume^Porod	12	nm³

SASDMD7 – ESX-1 secretion-associated protein EspB large construct

ESX-1 secretion-associated protein EspB experimental SAS data

ESX-1 secretion-associated protein EspB Kratky plot

Sample:	ESX-1 secretion-associated protein EspB monomer, 48 kDa Mycobacterium tuberculosis (strain … protein
Buffer:	20 mM Tris-HCl, 300 mM NaCl, pH: 8
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2018 Sep 21

The crystal structure of the EspB-EspK virulence factor-chaperone complex suggests an additional type VII secretion mechanism in M. tuberculosis. J Biol Chem :102761 (2022)
Gijsbers A, Eymery M, Gao Y, Menart I, Vinciauskaite V, Siliqi D, Peters PJ, McCarthy A, Ravelli RBG

R_g^Guinier	5.0	nm
D_max	19.2	nm
Volume^Porod	119	nm³

SASDME7 – ESX-1 secretion-associated protein EspB medium construct

Sample:	ESX-1 secretion-associated protein EspB monomer, 37 kDa Mycobacterium tuberculosis (strain … protein
Buffer:	20 mM Tris-HCl, 300 mM NaCl, pH: 8
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2018 Sep 21

R_g^Guinier	3.5	nm
D_max	13.3	nm
Volume^Porod	75	nm³

SASDMF7 – ESX-1 secretion-associated protein EspB small construct

Sample:	ESX-1 secretion-associated protein EspB monomer, 30 kDa Mycobacterium tuberculosis (strain … protein
Buffer:	20 mM Tris-HCl, 300 mM NaCl, pH: 8
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2018 Sep 21

R_g^Guinier	3.3	nm
D_max	10.8	nm
Volume^Porod	56	nm³

SASDMG7 – ESX-1 secretion-associated protein EspB large construct bound to ESX-1 secretion-associated protein EspK — EspBL-K complex

ESX-1 secretion-associated protein EspKESX-1 secretion-associated protein EspB experimental SAS data

ESX-1 secretion-associated protein EspK ESX-1 secretion-associated protein EspB Kratky plot

Sample:	ESX-1 secretion-associated protein EspK monomer, 27 kDa Mycobacterium tuberculosis (strain … protein ESX-1 secretion-associated protein EspB monomer, 48 kDa Mycobacterium tuberculosis (strain … protein
Buffer:	20 mM Tris-HCl, 300 mM NaCl, pH: 8
Experiment:	SAXS data collected at B21, Diamond Light Source on 2019 Apr 12

R_g^Guinier	5.0	nm
D_max	18.3	nm
Volume^Porod	128	nm³

SASDMH7 – ESX-1 secretion-associated protein EspB medium construct bound to ESX-1 secretion-associated protein EspK — EspBM-K complex

Sample:	ESX-1 secretion-associated protein EspK monomer, 27 kDa Mycobacterium tuberculosis (strain … protein ESX-1 secretion-associated protein EspB monomer, 37 kDa Mycobacterium tuberculosis (strain … protein
Buffer:	20 mM Tris-HCl, 300 mM NaCl, pH: 8
Experiment:	SAXS data collected at B21, Diamond Light Source on 2019 Apr 12

R_g^Guinier	4.3	nm
D_max	15.7	nm
Volume^Porod	100	nm³

SASDMJ7 – ESX-1 secretion-associated protein EspB small construct bound to ESX-1 secretion-associated protein EspK — EspBS-K complex

Sample:	ESX-1 secretion-associated protein EspK monomer, 27 kDa Mycobacterium tuberculosis (strain … protein ESX-1 secretion-associated protein EspB monomer, 30 kDa Mycobacterium tuberculosis (strain … protein
Buffer:	20 mM Tris-HCl, 300 mM NaCl, pH: 8
Experiment:	SAXS data collected at B21, Diamond Light Source on 2019 Sep 12

R_g^Guinier	4.1	nm
D_max	13.0	nm
Volume^Porod	113	nm³

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