Schistosoma mansoni Venom Allergen-like protein 11 (SmVAL11) in complex with cognate polyclonal antibody (pAb anti-SmVAL11)

Adriana Erica Miele.

SASDZB8 – Schistosoma mansoni Venom Allergen-like protein isoform 11 (SmVAL11) in complex with pAb anti-SmVAL11, ratio 2:1 (2nd peak)

Venom Allergen-like protein 11
Polyclonal antibody anti-SmVAL11
MWexperimental 147 kDa
MWexpected 187 kDa
VPorod 206 nm3
log I(s) 1.58×100 1.58×10-1 1.58×10-2 1.58×10-3
Venom Allergen-like protein 11 Polyclonal antibody anti-SmVAL11 small angle scattering data  s, nm-1
ln I(s)
Venom Allergen-like protein 11 Polyclonal antibody anti-SmVAL11 Guinier plot ln 1.59×100 Rg: 4.9 nm 0 (4.9 nm)-2 s2
(sRg)2I(s)/I(0)
Venom Allergen-like protein 11 Polyclonal antibody anti-SmVAL11 Kratky plot 1.104 0 3 sRg
p(r)
Venom Allergen-like protein 11 Polyclonal antibody anti-SmVAL11 pair distance distribution function Rg: 5.0 nm 0 Dmax: 17.2 nm

Data validation


Fits and models


log I(s)
 s, nm-1
Venom Allergen-like protein 11 Polyclonal antibody anti-SmVAL11 DAMMIF model

Synchrotron SAXS data from solutions of Schistosoma mansoni Venom Allergen-like protein isoform 11 (SmVAL11) in complex with pAb anti-SmVAL11, ratio 2:1 (2nd peak) in 25 mM MES, 125 mM NaCl, 1 mM EDTA, pH 6.8 were collected on the SWING beam line at the SOLEIL storage ring (Saint-Aubin, France) using a Eiger 4M detector at a sample-detector distance of 2 m and at a wavelength of λ = 0.76 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). In-line size-exclusion chromatography (SEC) SAS was employed. The SEC parameters were as follows: A 45.00 μl sample at 2.7 mg/ml was injected at a 0.30 ml/min flow rate onto a column at 20°C. 2600 successive 1 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.

SmVAL11 in complex with its cognate pAb at a 2:1 ratio was analyzed by SEC-SAXS. Spectral deconvolution was performed using Evolving Factor Analysis (EFA), revealing two distinct peaks. The present analysis focuses on the second peak.

Venom Allergen-like protein 11 (SmVAL11)
Mol. type   Protein
Organism   Schistosoma mansoni
Olig. state   Other
Mon. MW   47 kDa
 
UniProt   Q1WL54 (1-423)
Sequence   FASTA
 
Polyclonal antibody anti-SmVAL11 (pAb anti-SmVAL11)
Mol. type   Protein
Organism   Lagomorph
Olig. state   Monomer
Mon. MW   0.1 kDa
Sequence   FASTA