Schistosoma mansoni Venom Allergen-like protein 11 (SmVAL11) in complex with cognate polyclonal antibody (pAb anti-SmVAL11)

SASDZH8 – Schistosoma mansoni Venom Allergen-like protein isoform 11 (SmVAL11) - Full length

Venom Allergen-like protein 11
MWexperimental 40 kDa
MWexpected 47 kDa
VPorod 59 nm3
log I(s) 1.52×100 1.52×10-1 1.52×10-2 1.52×10-3
Venom Allergen-like protein 11 small angle scattering data  s, nm-1
ln I(s)
Venom Allergen-like protein 11 Guinier plot ln 1.53×100 Rg: 3.9 nm 0 (3.9 nm)-2 s2
(sRg)2I(s)/I(0)
Venom Allergen-like protein 11 Kratky plot 1.104 0 3 sRg
p(r)
Venom Allergen-like protein 11 pair distance distribution function Rg: 4.2 nm 0 Dmax: 18 nm

Data validation


Fits and models


log I(s)
 s, nm-1

Synchrotron SAXS data from solutions of Schistosoma mansoni Venom Allergen-like protein isoform 11 (SmVAL11) - Full length in 25 mM MES, 125 mM NaCl, 1 mM EDTA, pH 6.8 were collected on the SWING beam line at the SOLEIL storage ring (Saint-Aubin, France) using a Eiger 4M detector at a sample-detector distance of 2 m and at a wavelength of λ = 0.76 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). In-line size-exclusion chromatography (SEC) SAS was employed. The SEC parameters were as follows: A 45.00 μl sample at 11 mg/ml was injected at a 0.30 ml/min flow rate onto a GE Superdex 200 Increase 3.2/300 column at 20°C. 2400 successive 1 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.

SmVAL11 is a 45 kDa protein containing two SCP/TAPS domains arranged in tandem and connected by a flexible linker. The protein is prone to autocleavage at the linker region, resulting in a heterogeneous sample containing multiple species in solution. To address this, SAXS measurements were coupled to Size Exclusion Chromatography (SEC-SAXS) to separate and individually analyse the different populations. The scattering data presented here were obtained by Evolving Factor Analysis (EFA) deconvolution of the most intense elution peak, as implemented in RAW, and likely correspond to the full-length SmVAL11 protein.

Venom Allergen-like protein 11 (SmVAL11)
Mol. type   Protein
Organism   Schistosoma mansoni
Olig. state   Other
Mon. MW   47 kDa
 
UniProt   Q1WL54 (1-423)
Sequence   FASTA