Mapping and characterization of G‐quadruplexes in monkeypox genomes

Pereira H, Gemmill D, Siddiqui M, Vasudeva G, Patel T
Journal of Medical Virology 95(5) (2023 May 09)

doi: 10.1002/jmv.28783

Submitted to SASBDB: 2022 Sep 27 Published in SASBDB: 2023 May 16

SASDQJ6 – Monkeypox viral synthetic DNA fragment (DNA sequence 1, MP1) Sample: Monekypox DNA sequence 1 monomer, 6 kDa Monkeypox virus DNA Buffer: 20 mM HEPES, 100 mM KCl, and 0.2 mM EDTA, pH: 7.4 Experiment: SAXS data collected at B21, Diamond Light Source on 2022 Sep 23 RgGuinier 1.7 nm Dmax 4.4 nm VolumePorod 14 nm3

SASDQK6 – Monkeypox viral synthetic DNA fragment (DNA sequence 2, MP2) Sample: Monekypox DNA sequence 1 monomer, 6 kDa Monkeypox virus DNA Buffer: 20 mM HEPES, 100 mM KCl, and 0.2 mM EDTA, pH: 7.4 Experiment: SAXS data collected at B21, Diamond Light Source on 2022 Sep 23 RgGuinier 1.6 nm Dmax 4.5 nm VolumePorod 11 nm3

SASDQL6 – Monkeypox viral synthetic DNA fragment (DNA sequence 1, MP1 mutant) Sample: Monekypox DNA sequence 1 mutant monomer, 6 kDa Monkeypox virus DNA Buffer: 20 mM HEPES, 100 mM KCl, and 0.2 mM EDTA, pH: 7.4 Experiment: SAXS data collected at B21, Diamond Light Source on 2022 Sep 23 RgGuinier 1.9 nm Dmax 5.5 nm VolumePorod 16 nm3

SASDQM6 – Monkeypox viral synthetic DNA fragment (DNA sequence 2, MP2 mutant) Sample: Monekypox DNA sequence 2 mutant monomer, 6 kDa Monkeypox virus DNA Buffer: 20 mM HEPES, 100 mM KCl, and 0.2 mM EDTA, pH: 7.4 Experiment: SAXS data collected at B21, Diamond Light Source on 2022 Sep 23 RgGuinier 1.9 nm Dmax 6.0 nm VolumePorod 8 nm3