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10 hits found for Castaneda

SASDP93 – K48-linked tetraubiquitin (Ub4)

Polyubiquitin-B experimental SAS data
Polyubiquitin-B Kratky plot
Sample: Polyubiquitin-B monomer, 34 kDa Homo sapiens protein
Buffer: 20 mM sodium phosphate, 0.5 mM EDTA, 0.02% NaN3, pH: 6.8
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2021 Oct 8
Mechanistic insights into enhancement or inhibition of phase separation by different polyubiquitin chains. EMBO Rep :e55056 (2022)
Dao TP, Yang Y, Presti MF, Cosgrove MS, Hopkins JB, Ma W, Loh SN, Castañeda CA
RgGuinier 2.6 nm
Dmax 95.0 nm
VolumePorod 44 nm3

SASDPA3 – K63-linked tetraubiquitin (Ub4)

Polyubiquitin-B experimental SAS data
Polyubiquitin-B Kratky plot
Sample: Polyubiquitin-B monomer, 34 kDa Homo sapiens protein
Buffer: 20 mM sodium phosphate, 0.5 mM EDTA, 0.02% NaN3, pH: 6.8
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2021 Oct 8
Mechanistic insights into enhancement or inhibition of phase separation by different polyubiquitin chains. EMBO Rep :e55056 (2022)
Dao TP, Yang Y, Presti MF, Cosgrove MS, Hopkins JB, Ma W, Loh SN, Castañeda CA
RgGuinier 3.2 nm
Dmax 13.0 nm
VolumePorod 44 nm3

SASDPB3 – M1-linked tetraubiquitin (Ub4)

Polyubiquitin-B experimental SAS data
Polyubiquitin-B Kratky plot
Sample: Polyubiquitin-B monomer, 34 kDa Homo sapiens protein
Buffer: 20 mM sodium phosphate, 0.5 mM EDTA, 0.02% NaN3, pH: 6.8
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2021 Oct 8
Mechanistic insights into enhancement or inhibition of phase separation by different polyubiquitin chains. EMBO Rep :e55056 (2022)
Dao TP, Yang Y, Presti MF, Cosgrove MS, Hopkins JB, Ma W, Loh SN, Castañeda CA
RgGuinier 3.2 nm
Dmax 12.0 nm
VolumePorod 46 nm3

SASDPC3 – HOTag6 tetramerization domain followed by a 10-Gly linker and monoubiquitin

Polyubiquitin-B experimental SAS data
Polyubiquitin-B Kratky plot
Sample: Polyubiquitin-B tetramer, 53 kDa Homo sapiens protein
Buffer: 20 mM sodium phosphate, 0.5 mM EDTA, 0.02% NaN3, pH: 6.8
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2021 Oct 8
Mechanistic insights into enhancement or inhibition of phase separation by different polyubiquitin chains. EMBO Rep :e55056 (2022)
Dao TP, Yang Y, Presti MF, Cosgrove MS, Hopkins JB, Ma W, Loh SN, Castañeda CA
RgGuinier 3.8 nm
Dmax 14.0 nm
VolumePorod 115 nm3

SASDZ99 – Full-length yeast shuttle protein Dsk2 (200 ul injection)

Ubiquitin domain-containing protein DSK2 experimental SAS data
Ubiquitin domain-containing protein DSK2 Kratky plot
Sample: Ubiquitin domain-containing protein DSK2 monomer, 39 kDa Saccharomyces cerevisiae protein
Buffer: 20 mM sodium phosphate, 0.5 mM EDTA, 0.02% NaN3, pH: 6.8
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2026 Feb 13
Intramolecular Interactions between Folded and Disordered Regions Shape Ubiquilin Structure and Function Advanced Science (2026)
Niblo J, Acharya N, Watkins M, Castañeda C, Sukenik S
RgGuinier 3.7 nm

SASDZA9 – Full-length yeast shuttle protein Dsk2 (300 ul injection volume)

Ubiquitin domain-containing protein DSK2 experimental SAS data
Ubiquitin domain-containing protein DSK2 Kratky plot
Sample: Ubiquitin domain-containing protein DSK2 monomer, 39 kDa Saccharomyces cerevisiae protein
Buffer: 20 mM sodium phosphate, 0.5 mM EDTA, 0.02% NaN3, pH: 6.8
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2026 Mar 7
Intramolecular Interactions between Folded and Disordered Regions Shape Ubiquilin Structure and Function Advanced Science (2026)
Niblo J, Acharya N, Watkins M, Castañeda C, Sukenik S
RgGuinier 3.8 nm

SASDZB9 – Full-length yeast shuttle protein Dsk2 with single point mutation (I45A)

Ubiquitin domain-containing protein DSK2 I45A experimental SAS data
Ubiquitin domain-containing protein DSK2 I45A Kratky plot
Sample: Ubiquitin domain-containing protein DSK2 I45A monomer, 39 kDa Saccharomyces cerevisiae protein
Buffer: 20 mM sodium phosphate, 0.5 mM EDTA, 0.02% NaN3, pH: 6.8
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2026 Feb 13
Intramolecular Interactions between Folded and Disordered Regions Shape Ubiquilin Structure and Function Advanced Science (2026)
Niblo J, Acharya N, Watkins M, Castañeda C, Sukenik S
RgGuinier 3.9 nm

SASDZC9 – Full-length yeast shuttle protein Dsk2 with HS1 deletion (residues 114-134)

DSK2 with HS1 deletion experimental SAS data
DSK2 with HS1 deletion Kratky plot
Sample: DSK2 with HS1 deletion monomer, 37 kDa Saccharomyces cerevisiae protein
Buffer: 20 mM sodium phosphate, 0.5 mM EDTA, 0.02% NaN3, pH: 6.8
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2026 Feb 13
Intramolecular Interactions between Folded and Disordered Regions Shape Ubiquilin Structure and Function Advanced Science (2026)
Niblo J, Acharya N, Watkins M, Castañeda C, Sukenik S
RgGuinier 3.6 nm

SASDZD9 – Full-length yeast shuttle protein Dsk2 with HS2 deletion (residues 279-291)

DSK2 with HS2 deletion experimental SAS data
DSK2 with HS2 deletion Kratky plot
Sample: DSK2 with HS2 deletion monomer, 38 kDa Saccharomyces cerevisiae protein
Buffer: 20 mM sodium phosphate, 0.5 mM EDTA, 0.02% NaN3, pH: 6.8
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2026 Feb 13
Intramolecular Interactions between Folded and Disordered Regions Shape Ubiquilin Structure and Function Advanced Science (2026)
Niblo J, Acharya N, Watkins M, Castañeda C, Sukenik S
RgGuinier 3.9 nm

SASDZE9 – Full-length yeast shuttle protein Dsk2 with HS3 deletion (residues 303-313)

DSK2 with HS3 deletion experimental SAS data
DSK2 with HS3 deletion Kratky plot
Sample: DSK2 with HS3 deletion monomer, 38 kDa Saccharomyces cerevisiae protein
Buffer: 20 mM sodium phosphate, 0.5 mM EDTA, 0.02% NaN3, pH: 6.8
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2026 Mar 7
Intramolecular Interactions between Folded and Disordered Regions Shape Ubiquilin Structure and Function Advanced Science (2026)
Niblo J, Acharya N, Watkins M, Castañeda C, Sukenik S
RgGuinier 4.1 nm