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10 hits found for Sundaramoorthy

SASDWB7 – Dynamin central region family protein from Leishmania donovani DLP1 G354D / R357S

Dynamin central region family protein experimental SAS data
BILBOMD model
Sample: Dynamin central region family protein dimer, 165 kDa Leishmania donovani protein
Buffer: 20 mM HEPES, 200 mM NaCl, 3% glycerol, pH: 7.4
Experiment: SAXS data collected at SWING, SOLEIL on 2024 Apr 4
Biophysical analysis of an oligomerization-attenuated variant of the Leishmania donovani dynamin-1-like protein. Mol Biochem Parasitol 263:111691 (2025)
...Sundaramoorthy R, Tulloch L, Monsieurs P, Eadsforth TC, Pintelon I, Timmermans JP, Dujardin JC, Domagalska MA, Caljon G, De Rycker M, Postis VLG, Wyllie S, Sterckx YG
RgGuinier 6.6 nm
Dmax 25.0 nm
VolumePorod 340 nm3

SASDBU7 – DNA binding domain (DBD) of chromo domain-containing protein 1 (Chd1: 1009-1274)

chromodomain helicase DNA binding domain experimental SAS data
GASBOR model
Sample: chromodomain helicase DNA binding domain monomer, 31 kDa Saccharomyces cerevisiae protein
Buffer: 50mM Hepes 150mM NaCl, pH: 7.5
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2009 Nov 20
Structural reorganization of the chromatin remodeling enzyme Chd1 upon engagement with nucleosomes. Elife 6 (2017)
Sundaramoorthy R, Hughes AL, Singh V, Wiechens N, Ryan DP, El-Mkami H, Petoukhov M, Svergun DI, Treutlein B, Quack S, Fischer M, Michaelis J, Böttcher B, Norman DG, Owen-Hughes T
RgGuinier 2.6 nm
Dmax 8.3 nm

SASDBV7 – Chromo-ATPase-DBD domains of chromo domain-containing protein 1 (Chd1: 133-1305)

chromodomain helicase DNA binding domain experimental SAS data
GASBOR model
Sample: chromodomain helicase DNA binding domain monomer, 135 kDa Saccharomyces cerevisiae protein
Buffer: 50mM Hepes 150mM NaCl, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2008 Nov 30
Structural reorganization of the chromatin remodeling enzyme Chd1 upon engagement with nucleosomes. Elife 6 (2017)
Sundaramoorthy R, Hughes AL, Singh V, Wiechens N, Ryan DP, El-Mkami H, Petoukhov M, Svergun DI, Treutlein B, Quack S, Fischer M, Michaelis J, Böttcher B, Norman DG, Owen-Hughes T
RgGuinier 4.2 nm
Dmax 15.4 nm
VolumePorod 280 nm3

SASDBW7 – N-terminal and chromo-ATPase-DBD domains of chromo domain-containing protein 1 (Chd1: 1-1305)

chromodomain helicase DNA binding domain experimental SAS data
GASBOR model
Sample: chromodomain helicase DNA binding domain monomer, 150 kDa Saccharomyces cerevisiae protein
Buffer: 50mM Hepes 150mM NaCl, pH: 7.5
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2008 Nov 30
Structural reorganization of the chromatin remodeling enzyme Chd1 upon engagement with nucleosomes. Elife 6 (2017)
Sundaramoorthy R, Hughes AL, Singh V, Wiechens N, Ryan DP, El-Mkami H, Petoukhov M, Svergun DI, Treutlein B, Quack S, Fischer M, Michaelis J, Böttcher B, Norman DG, Owen-Hughes T
RgGuinier 4.9 nm
Dmax 16.0 nm
VolumePorod 340 nm3

SASDBX7 – Chromo-ATPase domains of chromo domain-containing protein 1 (Chd1: 133-1010)

chromodomain helicase DNA binding domain experimental SAS data
GASBOR model
Sample: chromodomain helicase DNA binding domain monomer, 102 kDa Saccharomyces cerevisiae protein
Buffer: 50mM Hepes 150mM NaCl, pH: 7.5
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2008 Nov 30
Structural reorganization of the chromatin remodeling enzyme Chd1 upon engagement with nucleosomes. Elife 6 (2017)
Sundaramoorthy R, Hughes AL, Singh V, Wiechens N, Ryan DP, El-Mkami H, Petoukhov M, Svergun DI, Treutlein B, Quack S, Fischer M, Michaelis J, Böttcher B, Norman DG, Owen-Hughes T
RgGuinier 4.1 nm
Dmax 16.1 nm
VolumePorod 190 nm3

SASDBY7 – N-terminal and chromo-ATPase domains of chromo domain-containing protein 1 (Chd1: 1-1010)

chromodomain helicase DNA binding domain experimental SAS data
GASBOR model
Sample: chromodomain helicase DNA binding domain monomer, 117 kDa Saccharomyces cerevisiae protein
Buffer: 50mM Hepes 150mM NaCl, pH: 7.5
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2008 Nov 30
Structural reorganization of the chromatin remodeling enzyme Chd1 upon engagement with nucleosomes. Elife 6 (2017)
Sundaramoorthy R, Hughes AL, Singh V, Wiechens N, Ryan DP, El-Mkami H, Petoukhov M, Svergun DI, Treutlein B, Quack S, Fischer M, Michaelis J, Böttcher B, Norman DG, Owen-Hughes T
RgGuinier 4.5 nm
Dmax 12.0 nm
VolumePorod 228 nm3

SASDRB6 – Rabies CVS Phosphoprotein (P1)

Phosphoprotein experimental SAS data
Rabies CVS Phosphoprotein (P1) Rg histogram
Sample: Phosphoprotein dimer, 67 kDa Rabies virus (strain … protein
Buffer: 25 mM HEPES, 150 mM NaCl, 1 mM TCEP, pH: 7.4
Experiment: SAXS data collected at SAXS/WAXS, Australian Synchrotron on 2021 Mar 7
Conformational dynamics, RNA binding, and phase separation regulate the multifunctionality of rabies virus P protein. Nat Commun 16(1):9491 (2025)
...Sundaramoorthy V, Bell TDM, Gooley PR, Moseley GW
RgGuinier 4.7 nm
Dmax 25.0 nm
VolumePorod 230 nm3

SASDRX4 – Rabies virus CVS Phosphoprotein Isoform 3 (CVS P3)

Phosphoprotein (Isoform P3; C297S) experimental SAS data
Rabies virus CVS Phosphoprotein Isoform 3 (CVS P3) Rg histogram
Sample: Phosphoprotein (Isoform P3; C297S) dimer, 56 kDa Rabies virus (strain … protein
Buffer: 25 mM HEPES, 150 mM NaCl, 1 mM TCEP, pH: 7.4
Experiment: SAXS data collected at SAXS/WAXS, Australian Synchrotron on 2021 Mar 7
Conformational dynamics, RNA binding, and phase separation regulate the multifunctionality of rabies virus P protein. Nat Commun 16(1):9491 (2025)
...Sundaramoorthy V, Bell TDM, Gooley PR, Moseley GW
RgGuinier 4.2 nm
Dmax 17.0 nm
VolumePorod 141 nm3

SASDRZ4 – K214/R260 mutant of Rabies virus CVS Phosphoprotein Isoform 3 (KRm CVS P3)

Phosphoprotein (Isoform P3; K214A, R260A, D289N, C297S) experimental SAS data
EOM/RANCH model
Sample: Phosphoprotein (Isoform P3; K214A, R260A, D289N, C297S) dimer, 55 kDa Rabies virus (strain … protein
Buffer: 25 mM HEPES, 150 mM NaCl, 1 mM TCEP, pH: 7.4
Experiment: SAXS data collected at SAXS/WAXS, Australian Synchrotron on 2021 Mar 7
Conformational dynamics, RNA binding, and phase separation regulate the multifunctionality of rabies virus P protein. Nat Commun 16(1):9491 (2025)
...Sundaramoorthy V, Bell TDM, Gooley PR, Moseley GW
RgGuinier 4.6 nm
Dmax 22.5 nm
VolumePorod 180 nm3

SASDRY4 – D289N mutant of Rabies virus CVS Phosphoprotein Isoform 3 (CVS P3)

Phosphoprotein (Isoform P3; D289N, C297S) experimental SAS data
D289N mutant of Rabies virus CVS Phosphoprotein Isoform 3 (CVS P3) Rg histogram
Sample: Phosphoprotein (Isoform P3; D289N, C297S) dimer, 56 kDa Rabies virus (strain … protein
Buffer: 25 mM HEPES, 150 mM NaCl, 1 mM TCEP, pH: 7.4
Experiment: SAXS data collected at SAXS/WAXS, Australian Synchrotron on 2021 Mar 7
Conformational dynamics, RNA binding, and phase separation regulate the multifunctionality of rabies virus P protein. Nat Commun 16(1):9491 (2025)
...Sundaramoorthy V, Bell TDM, Gooley PR, Moseley GW
RgGuinier 3.9 nm
Dmax 17.0 nm
VolumePorod 128 nm3