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5 hits found for Yennawar

SASDXU3 – Farnesoid X Receptor Protein

Isoform 3 of Bile acid receptor experimental SAS data
ALPHAFOLD model
Sample: Isoform 3 of Bile acid receptor monomer, 41 kDa Homo sapiens protein
Buffer: 50 mM HEPES, 150 mM NaCl, 5 % glycerol, 1 mM DTT, 20 µM CDCA, pH: 7.4
Experiment: SAXS data collected at Rigaku BioSAXS-2000, Pennsylvania State University on 2024 May 9
DNA induces non-canonical dimerization of the farnesoid X receptor. Nucleic Acids Res 54(4) (2026)
...Yennawar N, Okafor CD
RgGuinier 3.5 nm
Dmax 11.6 nm
VolumePorod 75 nm3

SASDXV3 – Farnesoid X receptor homo-dimer bound to inverted repeat DNA

inverted repeat DNAIsoform 3 of Bile acid receptor experimental SAS data
ALPHAFOLD model
Sample: inverted repeat DNA monomer, 11 kDa DNA
Isoform 3 of Bile acid receptor dimer, 83 kDa Homo sapiens protein
Buffer: 50 mM HEPES, 150 mM NaCl, 5 % glycerol, 1 mM DTT, 20 µM CDCA, pH: 7.4
Experiment: SAXS data collected at Rigaku BioSAXS-2000, Pennsylvania State University on 2024 May 9
DNA induces non-canonical dimerization of the farnesoid X receptor. Nucleic Acids Res 54(4) (2026)
...Yennawar N, Okafor CD
RgGuinier 5.1 nm
Dmax 23.2 nm
VolumePorod 120 nm3

SASDTM5 – Proteusin peptide

NHLP leader peptide family natural product (I56V) experimental SAS data
NHLP leader peptide family natural product (I56V) Kratky plot
Sample: NHLP leader peptide family natural product (I56V) monomer, 9 kDa Methylovulum psychrotolerans protein
Buffer: 20 mM sodium phosphate (pH 7.5), 100 mM NaCl and 48 µM FAD, pH: 7.5
Experiment: SAXS data collected at Rigaku BioSAXS-2000, Pennsylvania State University on 2023 Jul 28
Disordered regions in proteusin peptides guide post-translational modification by a flavin-dependent RiPP brominase. Nat Commun 15(1):1265 (2024)
...Yennawar NH, Wu H, McShan AC, Agarwal V
RgGuinier 1.9 nm
Dmax 5.5 nm
VolumePorod 39 nm3

SASDXB9 – O’Nyong-Nyong virus (ONNV) nsP4 full length wild type

RNA-directed RNA polymerase nsP4 experimental SAS data
RNA-directed RNA polymerase nsP4 Kratky plot
Sample: RNA-directed RNA polymerase nsP4 monomer, 68 kDa O'nyong-nyong virus protein
Buffer: 25 mM HEPES, 1 mM TCEP, 5% glycerol and 500 mM NaCl., pH: 7.5
Experiment: SAXS data collected at Rigaku BioSAXS-2000, Pennsylvania State University on 2023 Jun 8
A fold switch regulates conformation of an alphavirus RNA-dependent RNA polymerase. Nucleic Acids Res 54(2) (2026)
...Yennawar NH, Cameron CE
RgGuinier 3.6 nm

SASDXC9 – O'Nyong Nyong virus C-terminus-50residues-nsP3-nsP4 fusion protein

50-residue-C-terminus-nsP3 fused with RNA-directed RNA polymerase nsP4 experimental SAS data
50-residue-C-terminus-nsP3 fused with RNA-directed RNA polymerase nsP4 Kratky plot
Sample: 50-residue-C-terminus-nsP3 fused with RNA-directed RNA polymerase nsP4 tetramer, 318 kDa O'nyong nyong virus protein
Buffer: 25 mM HEPES 5% glycerol, 1 mM TCEP, 500 mM NaCl., pH: 7.5
Experiment: SAXS data collected at Rigaku BioSAXS-2000, Pennsylvania State University on 2025 Aug 14
A fold switch regulates conformation of an alphavirus RNA-dependent RNA polymerase. Nucleic Acids Res 54(2) (2026)
...Yennawar NH, Cameron CE
RgGuinier 5.2 nm