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3 hits found for RNA bottom strand

SASDT65 – ...stranded RNA

Non-structural protein 1RNA top strandRNA bottom strand experimental SAS data
HADDOCK model
Sample: Non-structural protein 1 monomer, 16 kDa Influenza B virus protein
RNA top strand monomer, 5 kDa RNA
RNA bottom strand monomer, 5 kDa RNA
Buffer: 40 mM ammonium acetate, pH 5.5, 450 mM NaCl, 5 mM CaCl2, 0.02% NaN3, 50 mM arginine, pH: 5.5
Experiment: SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2017 May 18
...RNA to suppress RIG-I activation and the host antiviral response (2024)
Woltz R, Schweibenz B, Tsutakawa S, Zhao C, Ma L, Shurina B, Hura G, John R, Vorobiev S, Swapna G, Solotchi M, Tainer J, Krug R, Patel S, Montelione G
RgGuinier 2.8 nm
Dmax 10.3 nm
VolumePorod 23 nm3

SASDWL5 – ...RNA, an A-to-I hyper-edited 20mer dsRNA

I-RNA, Top-strandI-RNA, Bottom-strand experimental SAS data
I-RNA, Top-strand I-RNA, Bottom-strand Kratky plot
Sample: ...RNA, Top-strand monomer, 7 kDa RNA
...RNA, Bottom-strand monomer, 7 kDa RNA
Buffer: 25 mM sodium phosphate 25 mM sodium chloride, pH: 6.4
Experiment: SAXS data collected at BM29, ESRF on 2022 Nov 9
...RNA. Nucleic Acids Res 53(12) (2025)
Müller-Hermes C, Piomponi V, Hilber S, Asami S, Kreutz C, Bussi G, Sattler M
RgGuinier 2.0 nm
Dmax 6.9 nm
VolumePorod 17 nm3

SASDWM5 – ...RNA, non-edited 20mer dsRNA

A-RNA, Top-StrandA-RNA, Bottom-Strand experimental SAS data
A-RNA, Top-Strand A-RNA, Bottom-Strand Kratky plot
Sample: ...RNA, Top-Strand monomer, 6 kDa RNA
...RNA, Bottom-Strand monomer, 6 kDa RNA
Buffer: 25 mM sodium phosphate 25 mM sodium chloride, pH: 6.4
Experiment: SAXS data collected at BM29, ESRF on 2022 Nov 9
...RNA. Nucleic Acids Res 53(12) (2025)
Müller-Hermes C, Piomponi V, Hilber S, Asami S, Kreutz C, Bussi G, Sattler M
RgGuinier 1.8 nm
Dmax 6.2 nm
VolumePorod 17 nm3