Browse by MODEL: No model

SASDPV6 – Calmodulin

Calmodulin-1 experimental SAS data
Calmodulin-1 Kratky plot
Sample: Calmodulin-1 monomer, 17 kDa Homo sapiens protein
Buffer: 50 mM HEPES, 100 mM NaCl, 2 mM CaCl2, 1 mM TCEP, pH: 7.4
Experiment: SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2021 Sep 23
Binding by calmodulin is coupled to transient unfolding of the third FF domain of Prp40A. Protein Sci 32(4):e4606 (2023)
Díaz Casas A, Cordoba JJ, Ferrer BJ, Balakrishnan S, Wurm JE, Pastrana-Ríos B, Chazin WJ
RgGuinier 2.2 nm
Dmax 7.0 nm
VolumePorod 38 nm3

SASDQ87 – Solution structure of colibactin ClbK

Colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbK experimental SAS data
Colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbK Kratky plot
Sample: Colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbK dimer, 476 kDa Escherichia coli protein
Buffer: 50 mM Hepes pH 7.5, 200 mM NaCl, 5 mM DTT, 5 mM MgCl2, pH: 7.5
Experiment: SAXS data collected at BM29, ESRF on 2020 Sep 14
Architecture of a PKS-NRPS hybrid megaenzyme involved in the biosynthesis of the genotoxin colibactin Structure (2023)
Bonhomme S, Contreras-Martel C, Dessen A, Macheboeuf P
RgGuinier 8.0 nm
Dmax 30.0 nm
VolumePorod 1340 nm3

SASDFY4 – R4-15 human dystrophin fragment

Human dystrophin central domain R4-15 fragment experimental SAS data
Human dystrophin central domain R4-15 fragment Kratky plot
Sample: Human dystrophin central domain R4-15 fragment monomer, 150 kDa protein
Buffer: NaP 20 mM, NaCl 300 mM, EDTA 1 mM, Glycérol 2%, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2016 May 26
Dystrophin SAXS data
Raphael Dos Santos Morais
RgGuinier 9.7 nm
Dmax 47.5 nm

SASDFZ4 – R16-24 human dystrophin fragment

Human dystrophin central domain R16-24 fragment experimental SAS data
Human dystrophin central domain R16-24 fragment Kratky plot
Sample: Human dystrophin central domain R16-24 fragment monomer, 127 kDa protein
Buffer: NaP 20 mM, NaCl 300 mM, EDTA 1 mM, Glycérol 2%, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2016 Dec 17
Dystrophin SAXS data
Raphael Dos Santos Morais
RgGuinier 9.3 nm
Dmax 34.0 nm

SASDF25 – R16-24 del45-55 human dystrophin fragment

Human dystrophin central domain R16-24 del45-55 fragment experimental SAS data
Human dystrophin central domain R16-24 del45-55 fragment Kratky plot
Sample: Human dystrophin central domain R16-24 del45-55 fragment monomer, 58 kDa protein
Buffer: NaP 20 mM, NaCl 300 mM, EDTA 1 mM, Glycérol 2%, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2017 Sep 28
Dystrophin SAXS data
Raphael Dos Santos Morais
RgGuinier 4.7 nm
Dmax 18.3 nm

SASDF35 – R16-24 del45-51 human dystrophin fragment

Human dystrophin central domain R16-24 del45-51 fragment experimental SAS data
Human dystrophin central domain R16-24 del45-51 fragment Kratky plot
Sample: Human dystrophin central domain R16-24 del45-51 fragment monomer, 85 kDa protein
Buffer: NaP 20 mM, NaCl 300 mM, EDTA 1 mM, Glycérol 2%, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2017 Jul 13
Dystrophin SAXS data
Raphael Dos Santos Morais
RgGuinier 7.0 nm
Dmax 26.2 nm

SASDGM2 – R16-24 del44-54 human dystrophin fragment

Human dystrophin central domain R16-24 del44-54 fragment experimental SAS data
Human dystrophin central domain R16-24 del44-54 fragment Kratky plot
Sample: Human dystrophin central domain R16-24 del44-54 fragment monomer, 57 kDa Homo sapiens protein
Buffer: 20 mM Na-phosphate, 300 mM NaCl, 1 mM EDTA, 2% glycerol,, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2019 Jul 8
Dystrophin SAXS data
Raphael Dos Santos Morais
RgGuinier 6.4 nm
Dmax 25.0 nm
VolumePorod 159 nm3

SASDRA6 – Cell division protein FtsQ N-terminal soluble domain

Cell division protein FtsQ experimental SAS data
Cell division protein FtsQ Kratky plot
Sample: Cell division protein FtsQ monomer, 11 kDa Mycobacterium tuberculosis (strain … protein
Buffer: 20 mM phosphate buffer, 25 mM NaCl, pH: 6.5
Experiment: SAXS data collected at 5-ID-D DND-CAT, Advanced Photon Source (APS), Argonne National Laboratory on 2017 Jun 28
An Arg/Ala-rich helix in the N-terminal region of M. tuberculosis FtsQ is a potential membrane anchor of the Z-ring. Commun Biol 6(1):311 (2023)
Smrt ST, Escobar CA, Dey S, Cross TA, Zhou HX
RgGuinier 2.6 nm
Dmax 8.5 nm
VolumePorod 21 nm3

SASDQ78 – YbiB-ObgE GTPase complex

Uncharacterized protein YbiBGTPase Obg experimental SAS data
Uncharacterized protein YbiB GTPase Obg Kratky plot
Sample: Uncharacterized protein YbiB dimer, 75 kDa Escherichia coli (strain … protein
GTPase Obg dimer, 91 kDa Escherichia coli (strain … protein
Buffer: 20 mM HEPES, 150 mM NaCl, 5 mM MgCl2, 2 mM DTT, 5% glycerol, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2021 Oct 24
YbiB: a novel interactor of the GTPase ObgE. Nucleic Acids Res (2023)
Deckers B, Vercauteren S, De Kock V, Martin C, Lazar T, Herpels P, Dewachter L, Verstraeten N, Peeters E, Ballet S, Michiels J, Galicia C, Versées W
RgGuinier 4.7 nm
Dmax 18.6 nm
VolumePorod 291 nm3

SASDRX5 – Arabidopsis thaliana Toc75 Potra domains bound to synthetic antigen binding fragment sAB tc1

Protein TOC75-3, chloroplasticsynthetic antigen binding fragment tc1 experimental SAS data
Protein TOC75-3, chloroplastic synthetic antigen binding fragment tc1 Kratky plot
Sample: Protein TOC75-3, chloroplastic monomer, 35 kDa Arabidopsis thaliana protein
Synthetic antigen binding fragment tc1 monomer, 48 kDa synthetic construct protein
Buffer: phosphate buffered saline, pH: 7.5
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2020 Nov 23
Characterization of synthetic antigen binding fragments targeting Toc75 for the isolation of TOC in A. thaliana and P. sativum Structure (2023)
Srinivasan K, Erramilli S, Chakravarthy S, Gonzalez A, Kossiakoff A, Noinaj N
RgGuinier 3.8 nm
Dmax 14.0 nm
VolumePorod 125 nm3