Browse by MACROMOLECULE type: nucleic acid

SASDQM6 – Monkeypox viral synthetic DNA fragment (DNA sequence 2, MP2 mutant)

Monekypox DNA sequence 2 mutant experimental SAS data
DAMMIN model
Sample: Monekypox DNA sequence 2 mutant monomer, 6 kDa Monkeypox virus DNA
Buffer: 20 mM HEPES, 100 mM KCl, and 0.2 mM EDTA, pH: 7.4
Experiment: SAXS data collected at B21, Diamond Light Source on 2022 Sep 23
Mapping and characterization of G‐quadruplexes in monkeypox genomes Journal of Medical Virology 95(5) (2023)
Pereira H, Gemmill D, Siddiqui M, Vasudeva G, Patel T
RgGuinier 1.9 nm
Dmax 6.0 nm
VolumePorod 8 nm3

SASDRY3 – Kenics GAC rRNA + Mg: Time-Resolved 10 ms

58 nucleotide RNA L11-binding domain from E. coli 23S rRNA experimental SAS data
58 nucleotide RNA L11-binding domain from E. coli 23S rRNA Kratky plot
Sample: 58 nucleotide RNA L11-binding domain from E. coli 23S rRNA monomer, 19 kDa Escherichia coli RNA
Buffer: 10 mM Na-MOPSO, 100 mM KCl, pH: 6.5
Experiment: SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2018 May 9
Chaotic advection mixer for capturing transient states of diverse biological macromolecular systems with time-resolved small-angle X-ray scattering IUCrJ 10(3):363-375 (2023)
Zielinski K, Katz A, Calvey G, Pabit S, Milano S, Aplin C, San Emeterio J, Cerione R, Pollack L
RgGuinier 2.2 nm
Dmax 10.0 nm
VolumePorod 28 nm3

SASDRZ3 – Kenics GAC rRNA + Mg: Time-Resolved 32 ms

58 nucleotide RNA L11-binding domain from E. coli 23S rRNA experimental SAS data
58 nucleotide RNA L11-binding domain from E. coli 23S rRNA Kratky plot
Sample: 58 nucleotide RNA L11-binding domain from E. coli 23S rRNA monomer, 19 kDa Escherichia coli RNA
Buffer: 10 mM Na-MOPSO, 100 mM KCl, pH: 6.5
Experiment: SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2018 May 9
Chaotic advection mixer for capturing transient states of diverse biological macromolecular systems with time-resolved small-angle X-ray scattering IUCrJ 10(3):363-375 (2023)
Zielinski K, Katz A, Calvey G, Pabit S, Milano S, Aplin C, San Emeterio J, Cerione R, Pollack L
RgGuinier 2.2 nm
Dmax 10.0 nm
VolumePorod 27 nm3

SASDR24 – Kenics GAC rRNA + Mg: Time-Resolved 63 ms

58 nucleotide RNA L11-binding domain from E. coli 23S rRNA experimental SAS data
58 nucleotide RNA L11-binding domain from E. coli 23S rRNA Kratky plot
Sample: 58 nucleotide RNA L11-binding domain from E. coli 23S rRNA monomer, 19 kDa Escherichia coli RNA
Buffer: 10 mM Na-MOPSO, 100 mM KCl, pH: 6.5
Experiment: SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2018 May 9
Chaotic advection mixer for capturing transient states of diverse biological macromolecular systems with time-resolved small-angle X-ray scattering IUCrJ 10(3):363-375 (2023)
Zielinski K, Katz A, Calvey G, Pabit S, Milano S, Aplin C, San Emeterio J, Cerione R, Pollack L
RgGuinier 2.2 nm
Dmax 9.5 nm
VolumePorod 27 nm3

SASDR34 – Kenics GAC rRNA + Mg: Time-Resolved 100 ms

58 nucleotide RNA L11-binding domain from E. coli 23S rRNA experimental SAS data
58 nucleotide RNA L11-binding domain from E. coli 23S rRNA Kratky plot
Sample: 58 nucleotide RNA L11-binding domain from E. coli 23S rRNA monomer, 19 kDa Escherichia coli RNA
Buffer: 10 mM Na-MOPSO, 100 mM KCl, pH: 6.5
Experiment: SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2018 May 9
Chaotic advection mixer for capturing transient states of diverse biological macromolecular systems with time-resolved small-angle X-ray scattering IUCrJ 10(3):363-375 (2023)
Zielinski K, Katz A, Calvey G, Pabit S, Milano S, Aplin C, San Emeterio J, Cerione R, Pollack L
RgGuinier 2.2 nm
Dmax 10.0 nm
VolumePorod 28 nm3

SASDR44 – Kenics GAC rRNA + Mg: Time-Resolved 316 ms

58 nucleotide RNA L11-binding domain from E. coli 23S rRNA experimental SAS data
58 nucleotide RNA L11-binding domain from E. coli 23S rRNA Kratky plot
Sample: 58 nucleotide RNA L11-binding domain from E. coli 23S rRNA monomer, 19 kDa Escherichia coli RNA
Buffer: 10 mM Na-MOPSO, 100 mM KCl, pH: 6.5
Experiment: SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2018 May 9
Chaotic advection mixer for capturing transient states of diverse biological macromolecular systems with time-resolved small-angle X-ray scattering IUCrJ 10(3):363-375 (2023)
Zielinski K, Katz A, Calvey G, Pabit S, Milano S, Aplin C, San Emeterio J, Cerione R, Pollack L
RgGuinier 2.2 nm
Dmax 12.0 nm
VolumePorod 27 nm3

SASDR54 – Kenics GAC rRNA + Mg: Time-Resolved 631 ms

58 nucleotide RNA L11-binding domain from E. coli 23S rRNA experimental SAS data
58 nucleotide RNA L11-binding domain from E. coli 23S rRNA Kratky plot
Sample: 58 nucleotide RNA L11-binding domain from E. coli 23S rRNA monomer, 19 kDa Escherichia coli RNA
Buffer: 10 mM Na-MOPSO, 100 mM KCl, pH: 6.5
Experiment: SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2018 May 9
Chaotic advection mixer for capturing transient states of diverse biological macromolecular systems with time-resolved small-angle X-ray scattering IUCrJ 10(3):363-375 (2023)
Zielinski K, Katz A, Calvey G, Pabit S, Milano S, Aplin C, San Emeterio J, Cerione R, Pollack L
RgGuinier 2.3 nm
Dmax 9.8 nm
VolumePorod 26 nm3

SASDR64 – Kenics GAC rRNA + Mg: Time-Resolved 1000 ms

58 nucleotide RNA L11-binding domain from E. coli 23S rRNA experimental SAS data
58 nucleotide RNA L11-binding domain from E. coli 23S rRNA Kratky plot
Sample: 58 nucleotide RNA L11-binding domain from E. coli 23S rRNA monomer, 19 kDa Escherichia coli RNA
Buffer: 10 mM Na-MOPSO, 100 mM KCl, pH: 6.5
Experiment: SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2018 May 9
Chaotic advection mixer for capturing transient states of diverse biological macromolecular systems with time-resolved small-angle X-ray scattering IUCrJ 10(3):363-375 (2023)
Zielinski K, Katz A, Calvey G, Pabit S, Milano S, Aplin C, San Emeterio J, Cerione R, Pollack L
RgGuinier 2.3 nm
Dmax 11.0 nm
VolumePorod 26 nm3

SASDR74 – Kenics GAC rRNA + Mg: Equilibrium initial

58 nucleotide RNA L11-binding domain from E. coli 23S rRNA experimental SAS data
58 nucleotide RNA L11-binding domain from E. coli 23S rRNA Kratky plot
Sample: 58 nucleotide RNA L11-binding domain from E. coli 23S rRNA monomer, 19 kDa Escherichia coli RNA
Buffer: 10 mM Na-MOPSO, 100 mM KCl, pH: 6.5
Experiment: SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2018 May 9
Chaotic advection mixer for capturing transient states of diverse biological macromolecular systems with time-resolved small-angle X-ray scattering IUCrJ 10(3):363-375 (2023)
Zielinski K, Katz A, Calvey G, Pabit S, Milano S, Aplin C, San Emeterio J, Cerione R, Pollack L
RgGuinier 2.4 nm
Dmax 10.0 nm
VolumePorod 32 nm3

SASDR84 – Kenics GAC rRNA + Mg: Equilibrium final

58 nucleotide RNA L11-binding domain from E. coli 23S rRNA experimental SAS data
58 nucleotide RNA L11-binding domain from E. coli 23S rRNA Kratky plot
Sample: 58 nucleotide RNA L11-binding domain from E. coli 23S rRNA monomer, 19 kDa Escherichia coli RNA
Buffer: 10 mM Na-MOPSO, 100 mM KCl, pH: 6.5
Experiment: SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2018 May 9
Chaotic advection mixer for capturing transient states of diverse biological macromolecular systems with time-resolved small-angle X-ray scattering IUCrJ 10(3):363-375 (2023)
Zielinski K, Katz A, Calvey G, Pabit S, Milano S, Aplin C, San Emeterio J, Cerione R, Pollack L
RgGuinier 2.2 nm
Dmax 10.0 nm
VolumePorod 26 nm3