Small Angle Scattering Biological Data Bank SASBDB

Browse by MACROMOLECULE type: protein

SASDRR5 – Like Early Starvation 1

Sample:	At3g55760 monomer, 60 kDa Arabidopsis thaliana protein
Buffer:	50 mM Tris, 150 mM NaCl, 10% glycerol, 2 mM DTT, pH: 8
Experiment:	SAXS data collected at SWING, SOLEIL on 2016 Dec 8

LIKE EARLY STARVATION 1 and EARLY STARVATION 1 promote and stabilize amylopectin phase transition in starch biosynthesis. Sci Adv 9(21):eadg7448 (2023)
Liu C, Pfister B, Osman R, Ritter M, Heutinck A, Sharma M, Eicke S, Fischer-Stettler M, Seung D, Bompard C, Abt MR, Zeeman SC

R_g^Guinier	3.7	nm
D_max	16.0	nm
Volume^Porod	121	nm³

SASDRS5 – Early Starvation 1 from Arabidopsis thaliana

Inactive purple acid phosphatase-like protein experimental SAS data

Inactive purple acid phosphatase-like protein Kratky plot

Sample:	Inactive purple acid phosphatase-like protein monomer, 40 kDa Arabidopsis thaliana protein
Buffer:	50 mM Tris, 150 mM NaCl, 10% glycerol, 2 mM DTT, pH: 8
Experiment:	SAXS data collected at SWING, SOLEIL on 2016 Dec 8

R_g^Guinier	3.2	nm
D_max	11.5	nm
Volume^Porod	83	nm³

SASDSM2 – AtCP12-2 in an oxidized form

AtCP12-2 in an oxidized form Rg histogram

Sample:	CP12-2 (D77G) monomer, 8 kDa Arabidopsis thaliana protein
Buffer:	25 mM potassium phosphate, pH: 7.5
Experiment:	SAXS data collected at BM29, ESRF on 2016 Feb 15

Conformational Disorder Analysis of the Conditionally Disordered Protein CP12 from Arabidopsis thaliana in Its Different Redox States International Journal of Molecular Sciences 24(11):9308 (2023)
Del Giudice A, Gurrieri L, Galantini L, Fanti S, Trost P, Sparla F, Fermani S

R_g^Guinier	2.0	nm
D_max	9.0	nm
Volume^Porod	10	nm³

SASDSN2 – AtCP12-2 in a reduced form

Sample:	CP12-2 (D77G) monomer, 8 kDa Arabidopsis thaliana protein
Buffer:	25 mM potassium phosphate, pH: 7.5
Experiment:	SAXS data collected at BM29, ESRF on 2016 Feb 15

R_g^Guinier	2.3	nm
D_max	11.6	nm
Volume^Porod	27	nm³

SASDPY5 – Gcf1p protein

Sample:	Gcf1p monomer, 26 kDa Candida albicans (strain … protein
Buffer:	50mM Tris, 750mM NaCl, pH: 8
Experiment:	SAXS data collected at BM29, ESRF on 2017 Oct 10

Structural analysis of the Candida albicans mitochondrial DNA maintenance factor Gcf1p reveals a dynamic DNA-bridging mechanism. Nucleic Acids Res (2023)
Tarrés-Solé A, Battistini F, Gerhold JM, Piétrement O, Martínez-García B, Ruiz-López E, Lyonnais S, Bernadó P, Roca J, Orozco M, Le Cam E, Sedman J, Solà M

R_g^Guinier	3.7	nm
D_max	14.5	nm
Volume^Porod	80	nm³

SASDKS8 – Escherichia coli anaerobic fatty acid beta-oxidation trifunctional enzyme subunit alpha (anEcTFE-alpha)

Fatty acid oxidation complex subunit alpha experimental SAS data

Sample:	Fatty acid oxidation complex subunit alpha monomer, 77 kDa Escherichia coli (strain … protein
Buffer:	50 mM Tris, 500 mM NaCl, 5% glycerol, 2.5 mM DTT, pH: 8
Experiment:	SAXS data collected at BM29, ESRF on 2018 Jul 9

Structural basis for different membrane-binding properties of E. coli anaerobic and human mitochondrial β-oxidation trifunctional enzymes. Structure (2023)
Sah-Teli SK, Pinkas M, Hynönen MJ, Butcher SJ, Wierenga RK, Novacek J, Venkatesan R

R_g^Guinier	3.3	nm
D_max	11.2	nm
Volume^Porod	145	nm³

SASDP98 – Human apo iron-sulfur cluster assembly 1 (ISCA1)

Iron-sulfur cluster assembly 1 homolog, mitochondrial experimental SAS data

Sample:	Iron-sulfur cluster assembly 1 homolog, mitochondrial monomer, 14 kDa Homo sapiens protein
Buffer:	50 mM phosphate, 150 mM NaCl, 5 mM DTT, pH: 7
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2021 Mar 27

Structural plasticity of NFU1 upon interaction with binding partners: insights into the mitochondrial [4Fe-4S] cluster pathway Journal of Molecular Biology :168154 (2023)
Da Vela S, Saudino G, Lucarelli F, Banci L, Svergun D, Ciofi-Baffoni S

R_g^Guinier	1.9	nm
D_max	6.8	nm
Volume^Porod	25	nm³

SASDPA8 – Human apo NFU1 iron-sulfur cluster scaffold protein

NFU1 iron-sulfur cluster scaffold homolog, mitochondrial (F118S, E168G) experimental SAS data

Human apo NFU1 iron-sulfur cluster scaffold protein Rg histogram

Sample:	NFU1 iron-sulfur cluster scaffold homolog, mitochondrial (F118S, E168G) monomer, 22 kDa Homo sapiens protein
Buffer:	50 mM phosphate, 150 mM NaCl, 5 mM DTT, pH: 7
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2021 Mar 27

R_g^Guinier	2.4	nm
D_max	9.3	nm
Volume^Porod	32	nm³

SASDPB8 – Human apo iron-sulfur cluster assembly 1/NFU1 iron-sulfur cluster scaffold protein complex (ISCA1-NFU1)

Iron-sulfur cluster assembly 1 homolog, mitochondrialNFU1 iron-sulfur cluster scaffold homolog, mitochondrial (F118S, E168G) experimental SAS data

Sample:	Iron-sulfur cluster assembly 1 homolog, mitochondrial monomer, 14 kDa Homo sapiens protein NFU1 iron-sulfur cluster scaffold homolog, mitochondrial (F118S, E168G) monomer, 22 kDa Homo sapiens protein
Buffer:	50 mM phosphate, 150 mM NaCl, 5 mM DTT, pH: 7
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2021 Mar 27

R_g^Guinier	2.6	nm
D_max	9.0	nm
Volume^Porod	43	nm³

SASDPC8 – Human apo iron-sulfur cluster assembly 1/iron-sulfur cluster assembly 2 complex (ISCA1-ISCA2)

Iron-sulfur cluster assembly 1 homolog, mitochondrialIron-sulfur cluster assembly 2 homolog, mitochondrial experimental SAS data

Sample:	Iron-sulfur cluster assembly 1 homolog, mitochondrial monomer, 14 kDa Homo sapiens protein Iron-sulfur cluster assembly 2 homolog, mitochondrial monomer, 13 kDa Homo sapiens protein
Buffer:	50 mM phosphate, 150 mM NaCl, 5 mM DTT, pH: 7
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2021 Mar 27

R_g^Guinier	2.4	nm
D_max	7.8	nm
Volume^Porod	43	nm³

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