Small Angle Scattering Biological Data Bank SASBDB

Browse by ORGANISM: other species

SASDNB7 – C-terminal domain of pUL21 with N-terminal His-tag

Tegument protein UL21 (C-terminal domain) experimental SAS data

Sample:	Tegument protein UL21 (C-terminal domain) monomer, 29 kDa Human herpesvirus 1 … protein
Buffer:	20 mM Tris pH 8.5, 500 mM NaCl, 3% (v/v) glycerol, 1 mM DTT, pH: 8.5
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Sep 25

Herpes simplex virus 1 protein pUL21 alters ceramide metabolism by activating the inter-organelle transport protein CERT Journal of Biological Chemistry :102589 (2022)
Benedyk T, Connor V, Caroe E, Shamin M, Svergun D, Deane J, Jeffries C, Crump C, Graham S

R_g^Guinier	2.2	nm
D_max	8.5	nm
Volume^Porod	49	nm³

SASDPF2 – Structure of an extracellular superoxide dismutase from Onchocerca volvulus

Extracellular superoxide dismutase [Cu-Zn] experimental SAS data

Sample:	Extracellular superoxide dismutase [Cu-Zn] dimer, 34 kDa Onchocerca volvulus protein
Buffer:	50 mM Tris-HCl, 200 mM NaCl, 2 mM DTT, pH: 8
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2013 Nov 13

Crystal structure of an extracellular superoxide dismutase from Onchocerca volvulus and implications for parasite-specific drug development Acta Crystallographica Section F Structural Biology Communications 78(6) (2022)
Moustafa A, Perbandt M, Liebau E, Betzel C, Falke S

R_g^Guinier	2.6	nm
D_max	9.0	nm
Volume^Porod	55	nm³

SASDPB9 – SAXS analysis of pilus adhesin PitA from pilus islet-2 of Streptococcus oralis

von Willebrand factor type A domain protein experimental SAS data

Sample:	Von Willebrand factor type A domain protein monomer, 89 kDa Streptococcus oralis ATCC … protein
Buffer:	20 mM HEPES,150 mM NaCl, pH: 7.5
Experiment:	SAXS data collected at BM29, ESRF on 2017 May 12

New structural insights into the PI-2 pilus from Streptococcus oralis, an early dental plaque colonizer. FEBS J (2022)
Yadav RK, Krishnan V

R_g^Guinier	6.4	nm
D_max	29.2	nm
Volume^Porod	217	nm³

SASDLP8 – Human apo Nocturnin - Deletion construct (Δ107-120) - Extended

Nocturnin - Deletion construct - Δ107-120 experimental SAS data

Human apo Nocturnin - Deletion construct (Δ107-120) - Extended Rg histogram

Sample:	Nocturnin - Deletion construct - Δ107-120 monomer, 40 kDa protein
Buffer:	50 mM HEPES, 150 mM KCl, 10% glycerol, 5 mM MgCl2, 1 mM TCEP, pH: 7.5
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2021 Feb 7

The Disordered Amino Terminus of the Circadian Enzyme Nocturnin Modulates Its NADP(H) Phosphatase Activity by Changing Protein Dynamics. Biochemistry (2022)
Wickramaratne AC, Li L, Hopkins JB, Joachimiak LA, Green CB

R_g^Guinier	2.8	nm
D_max	11.2	nm
Volume^Porod	72	nm³

SASDLQ8 – Human apo Nocturnin - Deletion construct (Δ107-120) - Compact

Human apo Nocturnin - Deletion construct (Δ107-120) - Compact Rg histogram

Sample:	Nocturnin - Deletion construct - Δ107-120 monomer, 40 kDa protein
Buffer:	50 mM HEPES, 150 mM KCl, 10% glycerol, 5 mM MgCl2, 1 mM TCEP, pH: 7.5
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2021 Feb 7

R_g^Guinier	2.5	nm
D_max	10.0	nm
Volume^Porod	80	nm³