Browse by ORGANISM: other species

SASDLK3 – SH3 and multiple ankyrin repeat domains protein 3 with a point mutation (L68P)

SH3 and multiple ankyrin repeat domains protein 3 experimental SAS data
CORAL model
Sample: SH3 and multiple ankyrin repeat domains protein 3 monomer, 88 kDa Rattus norvegicus protein
Buffer: 100mM NaH2PO4, 100mM NaCl, 0.5mM DTT,, pH: 6.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2018 Jun 3
Autism associated SHANK3 missense point mutations impact conformational fluctuations and protein turnover at synapses. Elife 10 (2021)
Bucher M, Niebling S, Han Y, Molodenskiy D, Nia FH, Kreienkamp HJ, Svergun D, Kim E, Kostyukova AS, Kreutz MR, Mikhaylova M
RgGuinier 4.1 nm
Dmax 14.8 nm
VolumePorod 224 nm3

SASDLL3 – SH3 and multiple ankyrin repeat domains protein 3 with a point mutation (R12C)

SH3 and multiple ankyrin repeat domains protein 3 experimental SAS data
CORAL model
Sample: SH3 and multiple ankyrin repeat domains protein 3 monomer, 87 kDa Rattus norvegicus protein
Buffer: 100mM NaH2PO4, 100mM NaCl, 0.5mM DTT,, pH: 6.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2018 Jun 3
Autism associated SHANK3 missense point mutations impact conformational fluctuations and protein turnover at synapses. Elife 10 (2021)
Bucher M, Niebling S, Han Y, Molodenskiy D, Nia FH, Kreienkamp HJ, Svergun D, Kim E, Kostyukova AS, Kreutz MR, Mikhaylova M
RgGuinier 4.1 nm
Dmax 13.8 nm
VolumePorod 175 nm3

SASDJ96 – Trinucleosomes from Xenopus laevis (African clawed frog)

Histone H3Histone H4Histone H2A type 1Histone H2BNon-linker Ended Trinucleosome DNA experimental SAS data
Histone H3 Histone H4 Histone H2A type 1 Histone H2B Non-linker Ended Trinucleosome DNA Kratky plot
Sample: Histone H3 monomer, 15 kDa Xenopus laevis protein
Histone H4 monomer, 11 kDa Xenopus laevis protein
Histone H2A type 1 monomer, 14 kDa Xenopus laevis protein
Histone H2B monomer, 14 kDa Xenopus laevis protein
Non-linker Ended Trinucleosome DNA monomer, 172 kDa DNA
Buffer: 20 mM Tris 150 mM NaCl 1 mM EDTA 1 mM DTT 50% w/v sucrose, pH: 7.5
Experiment: SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2016 Mar 11
Solution structure(s) of trinucleosomes from contrast variation SAXS Nucleic Acids Research (2021)
Mauney A, Muthurajan U, Luger K, Pollack L
RgGuinier 12.9 nm
Dmax 41.8 nm

SASDKQ9 – Chaperone protein IpgC, symmetric dimer from Shigella flexneri

Chaperone protein IpgC experimental SAS data
CORAL model
Sample: Chaperone protein IpgC dimer, 39 kDa Shigella flexneri protein
Buffer: 20 mM HEPES, 100 mM NaCl, pH: 7.4
Experiment: SAXS data collected at BM29, ESRF on 2012 Dec 10
Structural Insights of Shigella Translocator IpaB and Its Chaperone IpgC in Solution Frontiers in Cellular and Infection Microbiology 11 (2021)
Ferrari M, Charova S, Sansonetti P, Mylonas E, Gazi A
RgGuinier 2.7 nm
Dmax 9.0 nm
VolumePorod 56 nm3

SASDKR9 – The chaperone protein IpgC/invasin IpaB heterodimer complex from Shigella flexneri

T3SS Chaperone protein IpgCInvasin IpaB experimental SAS data
EOM/RANCH model
Sample: T3SS Chaperone protein IpgC monomer, 20 kDa Shigella flexneri protein
Invasin IpaB monomer, 62 kDa Shigella flexneri protein
Buffer: 20 mM HEPES, 100 mM NaCl, pH: 7.4
Experiment: SAXS data collected at BM29, ESRF on 2012 Dec 10
Structural Insights of Shigella Translocator IpaB and Its Chaperone IpgC in Solution Frontiers in Cellular and Infection Microbiology 11 (2021)
Ferrari M, Charova S, Sansonetti P, Mylonas E, Gazi A
RgGuinier 3.9 nm
Dmax 14.0 nm
VolumePorod 165 nm3

SASDKA2 – Two titin I27 domains linked with RS linker

Two titin I27 domains linked with RS linker experimental SAS data
Two titin I27 domains linked with RS linker Rg histogram
Sample: Two titin I27 domains linked with RS linker monomer, 23 kDa protein
Buffer: 50 mM potassium phosphate, 300 mM KCl, DTT 2mM, pH: 7.6
Experiment: SAXS data collected at SWING, SOLEIL on 2019 Dec 4
Interdomain linkers tailor the stability of immunoglobulin repeats in polyproteins. Biochem Biophys Res Commun 550:43-48 (2021)
Joshi T, Garg S, Estaña A, Cortés J, Bernadó P, Das S, Kammath AR, Sagar A, Rakshit S
RgGuinier 3.0 nm

SASDKB2 – Two titin I27 domains linked with RS linker

Two titin I27 domains linked with RS linker experimental SAS data
Sample: Two titin I27 domains linked with RS linker monomer, 23 kDa protein
Buffer: 50 mM potassium phosphate, 300 mM KCl, DTT 2mM, pH: 7.6
Experiment: SAXS data collected at SWING, SOLEIL on 2019 Dec 4
Interdomain linkers tailor the stability of immunoglobulin repeats in polyproteins. Biochem Biophys Res Commun 550:43-48 (2021)
Joshi T, Garg S, Estaña A, Cortés J, Bernadó P, Das S, Kammath AR, Sagar A, Rakshit S
RgGuinier 3.0 nm

SASDKC2 – Two titin I27 domains linked with GGG linker

Two titin I27 domains linked with GGG linker experimental SAS data
Two titin I27 domains linked with GGG linker Rg histogram
Sample: Two titin I27 domains linked with GGG linker monomer, 23 kDa protein
Buffer: 50 mM potassium phosphate, 300 mM KCl, DTT 2mM, pH: 7.6
Experiment: SAXS data collected at SWING, SOLEIL on 2019 Dec 4
Interdomain linkers tailor the stability of immunoglobulin repeats in polyproteins. Biochem Biophys Res Commun 550:43-48 (2021)
Joshi T, Garg S, Estaña A, Cortés J, Bernadó P, Das S, Kammath AR, Sagar A, Rakshit S
RgGuinier 2.9 nm

SASDKD2 – Two titin I27 domains linked with VKA linker

Two titin I27 domains linked with VKA linker experimental SAS data
Two titin I27 domains linked with VKA linker Rg histogram
Sample: Two titin I27 domains linked with VKA linker monomer, 24 kDa protein
Buffer: 50 mM potassium phosphate, 300 mM KCl, DTT 2mM, pH: 7.6
Experiment: SAXS data collected at SWING, SOLEIL on 2019 Dec 4
Interdomain linkers tailor the stability of immunoglobulin repeats in polyproteins. Biochem Biophys Res Commun 550:43-48 (2021)
Joshi T, Garg S, Estaña A, Cortés J, Bernadó P, Das S, Kammath AR, Sagar A, Rakshit S
RgGuinier 3.1 nm

SASDKE2 – Two titin I27 domains linked with AAE linker

Two titin I27 domains linked with AAE linker experimental SAS data
Two titin I27 domains linked with AAE linker Rg histogram
Sample: Two titin I27 domains linked with AAE linker monomer, 24 kDa protein
Buffer: 50 mM potassium phosphate, 300 mM KCl, DTT 2mM, pH: 7.6
Experiment: SAXS data collected at SWING, SOLEIL on 2019 Dec 4
Interdomain linkers tailor the stability of immunoglobulin repeats in polyproteins. Biochem Biophys Res Commun 550:43-48 (2021)
Joshi T, Garg S, Estaña A, Cortés J, Bernadó P, Das S, Kammath AR, Sagar A, Rakshit S
RgGuinier 3.1 nm