Browse by ORGANISM: other species

SASDJ65 – S-adenosylmethionine (SAM) lyase Svi3-3 in presence of SAM

Phage-encoded SAM lyase Svi3-3 (including N-terminal His6-tag and Tev cleavage site) experimental SAS data
Phage-encoded SAM lyase Svi3-3 (including N-terminal His6-tag and Tev cleavage site) Kratky plot
Sample: Phage-encoded SAM lyase Svi3-3 (including N-terminal His6-tag and Tev cleavage site) trimer, 56 kDa Unknown environmental phage protein
Buffer: 25 mM Tris-HCl, 150 mM NaCl, 5 mM SAM, pH: 8
Experiment: SAXS data collected at B21, Diamond Light Source on 2016 Dec 9
Structure and mechanism of a phage-encoded SAM lyase revises catalytic function of enzyme family. Elife 10 (2021)
Guo X, Söderholm A, Kanchugal P S, Isaksen GV, Warsi O, Eckhard U, Trigüis S, Gogoll A, Jerlström-Hultqvist J, Åqvist J, Andersson DI, Selmer M
RgGuinier 2.5 nm
Dmax 9.1 nm
VolumePorod 89 nm3

SASDHQ9 – Proliferating cell nuclear antigen (PCNA) from pathogenic yeast Candida albicans

Proliferating cell nuclear antigen (C-terminal His-tagged) experimental SAS data
GASBOR model
Sample: Proliferating cell nuclear antigen (C-terminal His-tagged) trimer, 90 kDa Candida albicans protein
Buffer: 20 mM Tris-HCl (pH 7.5), 100 mM NaCl, 1 mM DTT, pH: 7.5
Experiment: SAXS data collected at BM29, ESRF on 2018 Sep 3
Structural analyses of PCNA from the fungal pathogen Candida albicans identify three regions with species-specific conformations. FEBS Lett (2021)
Sundaram R, Manohar K, Patel SK, Acharya N, Vasudevan D
RgGuinier 3.4 nm
Dmax 10.2 nm
VolumePorod 128 nm3

SASDG52 – 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC) vesicles: 30 nm filter extrusion

1,2-dimyristoyl-sn-glycero-3-phosphocholine experimental SAS data
OTHER [STATIC IMAGE] model
Sample: 1,2-dimyristoyl-sn-glycero-3-phosphocholine monomer, 1 kDa
Buffer: water, pH: 7
Experiment: SAXS data collected at EMBL P12, PETRA III on 2018 Jul 9
Restoring structural parameters of lipid mixtures from small-angle X-ray scattering data Journal of Applied Crystallography 54(1) (2021)
Konarev P, Gruzinov A, Mertens H, Svergun D
Dmax 66.0 nm

SASDG62 – 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC) vesicles: 50 nm filter extrusion

1,2-dimyristoyl-sn-glycero-3-phosphocholine experimental SAS data
OTHER [STATIC IMAGE] model
Sample: 1,2-dimyristoyl-sn-glycero-3-phosphocholine monomer, 1 kDa
Buffer: water, pH: 7
Experiment: SAXS data collected at EMBL P12, PETRA III on 2018 Jul 9
Restoring structural parameters of lipid mixtures from small-angle X-ray scattering data Journal of Applied Crystallography 54(1) (2021)
Konarev P, Gruzinov A, Mertens H, Svergun D
Dmax 81.5 nm

SASDG72 – 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC) vesicles: 100 nm filter extrusion

1,2-dimyristoyl-sn-glycero-3-phosphocholine experimental SAS data
OTHER [STATIC IMAGE] model
Sample: 1,2-dimyristoyl-sn-glycero-3-phosphocholine monomer, 1 kDa
Buffer: water, pH: 7
Experiment: SAXS data collected at EMBL P12, PETRA III on 2018 Jul 9
Restoring structural parameters of lipid mixtures from small-angle X-ray scattering data Journal of Applied Crystallography 54(1) (2021)
Konarev P, Gruzinov A, Mertens H, Svergun D
Dmax 111.0 nm

SASDG82 – 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC) vesicles: 200 nm filter extrusion

1,2-dimyristoyl-sn-glycero-3-phosphocholine experimental SAS data
OTHER [STATIC IMAGE] model
Sample: 1,2-dimyristoyl-sn-glycero-3-phosphocholine monomer, 1 kDa
Buffer: water, pH: 7
Experiment: SAXS data collected at EMBL P12, PETRA III on 2018 Jul 9
Restoring structural parameters of lipid mixtures from small-angle X-ray scattering data Journal of Applied Crystallography 54(1) (2021)
Konarev P, Gruzinov A, Mertens H, Svergun D
Dmax 147.0 nm

SASDG92 – 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC) vesicles: 30 nm filter extrusion

1,2-dipalmitoyl-sn-glycero-3-phosphocholine experimental SAS data
OTHER [STATIC IMAGE] model
Sample: 1,2-dipalmitoyl-sn-glycero-3-phosphocholine monomer, 1 kDa
Buffer: water, pH: 7
Experiment: SAXS data collected at EMBL P12, PETRA III on 2018 Jul 9
Restoring structural parameters of lipid mixtures from small-angle X-ray scattering data Journal of Applied Crystallography 54(1) (2021)
Konarev P, Gruzinov A, Mertens H, Svergun D
Dmax 66.0 nm

SASDGA2 – 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC) vesicles: 50 nm filter extrusion

1,2-dipalmitoyl-sn-glycero-3-phosphocholine experimental SAS data
OTHER [STATIC IMAGE] model
Sample: 1,2-dipalmitoyl-sn-glycero-3-phosphocholine monomer, 1 kDa
Buffer: water, pH: 7
Experiment: SAXS data collected at EMBL P12, PETRA III on 2018 Jul 9
Restoring structural parameters of lipid mixtures from small-angle X-ray scattering data Journal of Applied Crystallography 54(1) (2021)
Konarev P, Gruzinov A, Mertens H, Svergun D
Dmax 105.0 nm

SASDGB2 – 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC) vesicles: 100 nm filter extrusion

1,2-dipalmitoyl-sn-glycero-3-phosphocholine experimental SAS data
OTHER [STATIC IMAGE] model
Sample: 1,2-dipalmitoyl-sn-glycero-3-phosphocholine monomer, 1 kDa
Buffer: water, pH: 7
Experiment: SAXS data collected at EMBL P12, PETRA III on 2018 Jul 9
Restoring structural parameters of lipid mixtures from small-angle X-ray scattering data Journal of Applied Crystallography 54(1) (2021)
Konarev P, Gruzinov A, Mertens H, Svergun D
Dmax 112.0 nm

SASDGC2 – 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC) vesicles: 200 nm filter extrusion

1,2-dipalmitoyl-sn-glycero-3-phosphocholine experimental SAS data
OTHER [STATIC IMAGE] model
Sample: 1,2-dipalmitoyl-sn-glycero-3-phosphocholine monomer, 1 kDa
Buffer: water, pH: 7
Experiment: SAXS data collected at EMBL P12, PETRA III on 2018 Jul 9
Restoring structural parameters of lipid mixtures from small-angle X-ray scattering data Journal of Applied Crystallography 54(1) (2021)
Konarev P, Gruzinov A, Mertens H, Svergun D
Dmax 180.0 nm