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SASDFM5 – Mutant 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase, H110A tetramer, at pH 8.5

2-amino-3-carboxymuconate 6-semialdehyde decarboxylase experimental SAS data
CORAL model
Sample: 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase tetramer, 159 kDa Pseudomonas fluorescens protein
Buffer: 50 mM Tris, 5 mM DTT, pH: 8.5
Experiment: SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2018 Jul 15
Quaternary structure of α-amino-β-carboxymuconate-ϵ-semialdehyde decarboxylase (ACMSD) controls its activity. J Biol Chem 294(30):11609-11621 (2019)
Yang Y, Davis I, Matsui T, Rubalcava I, Liu A
RgGuinier 5.2 nm
Dmax 19.0 nm
VolumePorod 238 nm3

SASDFN5 – Wild type 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase, ACMSD tetramer, at pH 7.0

2-amino-3-carboxymuconate 6-semialdehyde decarboxylase experimental SAS data
CORAL model
Sample: 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase tetramer, 159 kDa Pseudomonas fluorescens protein
Buffer: 25 mM HEPES, 5 mM DTT, pH: 7
Experiment: SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2018 Jan 10
Quaternary structure of α-amino-β-carboxymuconate-ϵ-semialdehyde decarboxylase (ACMSD) controls its activity. J Biol Chem 294(30):11609-11621 (2019)
Yang Y, Davis I, Matsui T, Rubalcava I, Liu A
RgGuinier 4.7 nm
Dmax 17.5 nm
VolumePorod 195 nm3

SASDF76 – Polyphosphate-targeting protein A

Polyphosphate-targeting protein A experimental SAS data
CORAL model
Sample: Polyphosphate-targeting protein A dimer, 79 kDa Streptomyces chartreusis protein
Buffer: 20 mM Tris-HCl 400 mM NaCl, pH: 7.4
Experiment: SAXS data collected at EMBL P12, PETRA III on 2016 Nov 24
Structural and biochemical analysis of a phosin from Streptomyces chartreusis reveals a combined polyphosphate- and metal-binding fold. FEBS Lett (2019)
Werten S, Rustmeier NH, Gemmer M, Virolle MJ, Hinrichs W
RgGuinier 3.5 nm
Dmax 11.8 nm
VolumePorod 124 nm3

SASDEL6 – Glucosamine kinase from Streptacidiphilus jiangxiensis

Glucosamine kinase experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Glucosamine kinase monomer, 48 kDa Streptacidiphilus jiangxiensis protein
Buffer: 20 mM Tris-HCl, 150 mM NaCl, 10 mM MgCl2, 5 mM DTT, pH: 8
Experiment: SAXS data collected at BM29, ESRF on 2016 Nov 24
Molecular Fingerprints for a Novel Enzyme Family in Actinobacteria with Glucosamine Kinase Activity. MBio 10(3) (2019)
Manso JA, Nunes-Costa D, Macedo-Ribeiro S, Empadinhas N, Pereira PJB
RgGuinier 2.6 nm
Dmax 8.0 nm
VolumePorod 72 nm3

SASDEM6 – Glucosamine kinase from Streptacidiphilus jiangxiensis in presence of 0.2 M D-glucosamine

Glucosamine kinase experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Glucosamine kinase monomer, 48 kDa Streptacidiphilus jiangxiensis protein
Buffer: 20 mM Tris-HCl, 150 mM NaCl, 10 mM MgCl2, 5 mM DTT, 0.2 M D-glucosamine, pH: 8
Experiment: SAXS data collected at BM29, ESRF on 2017 Nov 20
Molecular Fingerprints for a Novel Enzyme Family in Actinobacteria with Glucosamine Kinase Activity. MBio 10(3) (2019)
Manso JA, Nunes-Costa D, Macedo-Ribeiro S, Empadinhas N, Pereira PJB
RgGuinier 2.6 nm
Dmax 8.0 nm
VolumePorod 78 nm3

SASDEN6 – Glucosamine kinase from Streptacidiphilus jiangxiensis in presence of 1 mM ATP

Glucosamine kinase experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Glucosamine kinase monomer, 48 kDa Streptacidiphilus jiangxiensis protein
Buffer: 20 mM Tris-HCl, 150 mM NaCl, 10 mM MgCl2, 5 mM DTT, 1 mM ATP, pH: 8
Experiment: SAXS data collected at BM29, ESRF on 2016 Nov 24
Molecular Fingerprints for a Novel Enzyme Family in Actinobacteria with Glucosamine Kinase Activity. MBio 10(3) (2019)
Manso JA, Nunes-Costa D, Macedo-Ribeiro S, Empadinhas N, Pereira PJB
RgGuinier 2.5 nm
Dmax 7.8 nm
VolumePorod 73 nm3

SASDEP6 – Glucosamine kinase from Streptacidiphilus jiangxiensis in presence of 0.2 M D-glucosamine and 1 mM ATP

Glucosamine kinase experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Glucosamine kinase monomer, 48 kDa Streptacidiphilus jiangxiensis protein
Buffer: 20 mM Tris-HCl, 150 mM NaCl, 10 mM MgCl2, 5 mM DTT, 0.2 M D-glucosamine, 1 mM ATP, pH: 8
Experiment: SAXS data collected at BM29, ESRF on 2017 Nov 20
Molecular Fingerprints for a Novel Enzyme Family in Actinobacteria with Glucosamine Kinase Activity. MBio 10(3) (2019)
Manso JA, Nunes-Costa D, Macedo-Ribeiro S, Empadinhas N, Pereira PJB
RgGuinier 2.5 nm
Dmax 7.7 nm
VolumePorod 76 nm3

SASDEQ6 – Glucosamine kinase from Streptacidiphilus jiangxiensis in presence of 50 mM D-glucose

Glucosamine kinase experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Glucosamine kinase monomer, 48 kDa Streptacidiphilus jiangxiensis protein
Buffer: 20 mM Tris-HCl, 150 mM NaCl, 10 mM MgCl2, 5 mM DTT, 50 mM D-glucose, pH: 8
Experiment: SAXS data collected at BM29, ESRF on 2018 Apr 13
Molecular Fingerprints for a Novel Enzyme Family in Actinobacteria with Glucosamine Kinase Activity. MBio 10(3) (2019)
Manso JA, Nunes-Costa D, Macedo-Ribeiro S, Empadinhas N, Pereira PJB
RgGuinier 2.6 nm
Dmax 8.0 nm
VolumePorod 73 nm3

SASDER6 – Glucosamine kinase from Streptacidiphilus jiangxiensis in presence of 50 mM D-glucose and 1 mM ATP

Glucosamine kinase experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Glucosamine kinase monomer, 48 kDa Streptacidiphilus jiangxiensis protein
Buffer: 20 mM Tris-HCl, 150 mM NaCl, 10 mM MgCl2, 5 mM DTT, 50 mM D-glucose, 1 mM ATP, pH: 8
Experiment: SAXS data collected at BM29, ESRF on 2016 Nov 24
Molecular Fingerprints for a Novel Enzyme Family in Actinobacteria with Glucosamine Kinase Activity. MBio 10(3) (2019)
Manso JA, Nunes-Costa D, Macedo-Ribeiro S, Empadinhas N, Pereira PJB
RgGuinier 2.5 nm
Dmax 7.7 nm
VolumePorod 73 nm3

SASDFA5 – Unposphorylated Resistance to inhibitors of cholinesterase 8 homolog A, Ric-8A, amino acids 1-452 (Rattus norvegicus)

Resistance to inhibitors of cholinesterase 8 homolog A experimental SAS data
Resistance to inhibitors of cholinesterase 8 homolog A Kratky plot
Sample: Resistance to inhibitors of cholinesterase 8 homolog A monomer, 51 kDa Rattus norvegicus protein
Buffer: 25 mM HEPES, 150 mM NaCl, pH: 8
Experiment: SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2018 Apr 24
Structure, Function, and Dynamics of the Gα Binding Domain of Ric-8A. Structure (2019)
Zeng B, Mou TC, Doukov TI, Steiner A, Yu W, Papasergi-Scott M, Tall GG, Hagn F, Sprang SR
RgGuinier 3.0 nm
Dmax 10.6 nm
VolumePorod 70 nm3