Browse by ORGANISM: other species

SASDLZ7 – The Fe–S cluster assembly 1 homolog of pigeon (6.9 mg/ml), Total X-ray exposure time : 2min

Iron-sulfur cluster assembly 1 homolog, mitochondrial experimental SAS data
Iron-sulfur cluster assembly 1 homolog, mitochondrial Kratky plot
Sample: Iron-sulfur cluster assembly 1 homolog, mitochondrial, 15 kDa Columba livia protein
Buffer: 20 mM Tris-HCl, 0.15 M NaCl, 10 mM 3-mercapto-1,2-propanediol, pH: 8
Experiment: SAXS data collected at BL-10C, Photon Factory (PF), High Energy Accelerator Research Organization (KEK) on 2021 Jun 8
Radiation resistivity of clISCA1
Shigeki Arai
RgGuinier 2.8 nm

SASDL28 – The Fe–S cluster assembly 1 homolog of pigeon (6.9 mg/ml), Total X-ray exposure time : 3min

Iron-sulfur cluster assembly 1 homolog, mitochondrial experimental SAS data
Iron-sulfur cluster assembly 1 homolog, mitochondrial Kratky plot
Sample: Iron-sulfur cluster assembly 1 homolog, mitochondrial, 15 kDa Columba livia protein
Buffer: 20 mM Tris-HCl, 0.15 M NaCl, 10 mM 3-mercapto-1,2-propanediol, pH: 8
Experiment: SAXS data collected at BL-10C, Photon Factory (PF), High Energy Accelerator Research Organization (KEK) on 2021 Jun 8
Radiation resistivity of clISCA1
Shigeki Arai
RgGuinier 2.7 nm

SASDL38 – The Fe–S cluster assembly 1 homolog of pigeon (6.9 mg/ml), Total X-ray exposure time : 4min

Iron-sulfur cluster assembly 1 homolog, mitochondrial experimental SAS data
Iron-sulfur cluster assembly 1 homolog, mitochondrial Kratky plot
Sample: Iron-sulfur cluster assembly 1 homolog, mitochondrial, 15 kDa Columba livia protein
Buffer: 20 mM Tris-HCl, 0.15 M NaCl, 10 mM 3-mercapto-1,2-propanediol, pH: 8
Experiment: SAXS data collected at BL-10C, Photon Factory (PF), High Energy Accelerator Research Organization (KEK) on 2021 Jun 8
Radiation resistivity of clISCA1
Shigeki Arai
RgGuinier 2.7 nm

SASDL48 – The Fe–S cluster assembly 1 homolog of pigeon (6.9 mg/ml), Total X-ray exposure time : 5min

Iron-sulfur cluster assembly 1 homolog, mitochondrial experimental SAS data
Iron-sulfur cluster assembly 1 homolog, mitochondrial Kratky plot
Sample: Iron-sulfur cluster assembly 1 homolog, mitochondrial, 15 kDa Columba livia protein
Buffer: 20 mM Tris-HCl, 0.15 M NaCl, 10 mM 3-mercapto-1,2-propanediol, pH: 8
Experiment: SAXS data collected at BL-10C, Photon Factory (PF), High Energy Accelerator Research Organization (KEK) on 2021 Jun 8
Radiation resistivity of clISCA1
Shigeki Arai
RgGuinier 2.7 nm

SASDSU5 – Histidine-phosphotransferase from Candida albicans

Phosphorelay intermediate protein YPD1 experimental SAS data
SASREF model
Sample: Phosphorelay intermediate protein YPD1 monomer, 19 kDa Candida albicans (strain … protein
Buffer: 50 mM Tris-HCl pH 8, 300 mM NaCl, pH: 8
Experiment: SAXS data collected at BM29, ESRF on 2022 Oct 10
Structural and functional insights underlying recognition of histidine phosphotransfer protein in fungal phosphorelay systems Communications Biology 7(1) (2024)
Paredes-Martínez F, Eixerés L, Zamora-Caballero S, Casino P
RgGuinier 2.5 nm
Dmax 11.5 nm
VolumePorod 33 nm3

SASDUV2 – MBP-fused Schistosoma mansoni Septin-10 C-terminal coiled-coil domain (MBP-SmSEPT10C)

Septin-10 experimental SAS data
OMEGAFOLD model
Sample: Septin-10 dimer, 110 kDa Schistosoma mansoni protein
Buffer: 50 mM Tris, 150 mM NaCl, pH: 7.5
Experiment: SAXS data collected at B21, Diamond Light Source on 2023 May 17
Novel lipid-interaction motifs within the C-terminal domain of Septin10 from Schistosoma mansoni Biochimica et Biophysica Acta (BBA) - Biomembranes :184371 (2024)
Cavini I, Fontes M, Zeraik A, Lopes J, Araújo A
RgGuinier 5.7 nm
Dmax 27.4 nm
VolumePorod 175 nm3

SASDUV3 – SAXS analysis of the LrpA backbone-Pilin Subunit from Ligilactobacillus ruminis

LPXTG-motif cell wall anchor domain protein experimental SAS data
ALPHAFOLD model
Sample: LPXTG-motif cell wall anchor domain protein monomer, 49 kDa Ligilactobacillus ruminis ATCC … protein
Buffer: 20 mM Tris-HCl, 150 mM NaCl, pH: 8
Experiment: SAXS data collected at EMBL P12, PETRA III on 2021 Nov 1
The crystal structure of the N-terminal domain of the backbone pilin LrpA reveals a new closure-and-twist motion for assembling dynamic pili in Ligilactobacillus ruminis Acta Crystallographica Section D Structural Biology 80(7):474-492 (2024)
Prajapati A, Palva A, von Ossowski I, Krishnan V
RgGuinier 3.5 nm
Dmax 10.6 nm
VolumePorod 59 nm3

SASDLF7 – The Fe–S cluster assembly 1 homolog of pigeon (clISCA1) without the magnetic circuit

Pigeon iron-sulfur cluster assembly 1 homolog, mitochondrial experimental SAS data
Pigeon iron-sulfur cluster assembly 1 homolog, mitochondrial Kratky plot
Sample: Pigeon iron-sulfur cluster assembly 1 homolog, mitochondrial, 15 kDa Columba livia protein
Buffer: 20 mM Tris-HCl, 0.15 M NaCl, 10 mM 3-mercapto-1,2-propanediol, pH: 8
Experiment: SAXS data collected at BL-10C, Photon Factory (PF), High Energy Accelerator Research Organization (KEK) on 2020 Nov 30
Pigeon iron-sulfur cluster assembly 1 homolog (clISCA1) 29.3 mg/ml
Shigeki Arai
RgGuinier 4.5 nm
Dmax 15.8 nm
VolumePorod 130 nm3

SASDUW6 – Alarmin release inhibitor (HpARI2), full-length

Alarmin release inhibitor (Δ1-62) experimental SAS data
DAMMIF model
Sample: Alarmin release inhibitor (Δ1-62) monomer, 26 kDa Heligmosomoides polygyrus protein
Buffer: 137 mM NaCl, 2.7 mM KCl, 10 mM phosphate buffer, 5% glycerol, pH: 7.2
Experiment: SAXS data collected at B21, Diamond Light Source on 2024 Feb 9
Structural basis for IL-33 recognition and its antagonism by the helminth effector protein HpARI2. Nat Commun 15(1):5226 (2024)
Jamwal A, Colomb F, McSorley HJ, Higgins MK
RgGuinier 2.6 nm
Dmax 9.9 nm
VolumePorod 31 nm3

SASDUX6 – Alarmin release inhibitor (HpARI2) domains CCP2 and CCP3

Alarmin release inhibitor (Δ1-125; N175Q, N190Q) experimental SAS data
DAMMIF model
Sample: Alarmin release inhibitor (Δ1-125; N175Q, N190Q) monomer, 19 kDa Heligmosomoides polygyrus protein
Buffer: 137 mM NaCl, 2.7 mM KCl, 10 mM phosphate buffer, 5% glycerol, pH: 7.2
Experiment: SAXS data collected at B21, Diamond Light Source on 2024 Feb 9
Structural basis for IL-33 recognition and its antagonism by the helminth effector protein HpARI2. Nat Commun 15(1):5226 (2024)
Jamwal A, Colomb F, McSorley HJ, Higgins MK
RgGuinier 2.3 nm
Dmax 8.2 nm
VolumePorod 28 nm3